Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1588 ATGGACTCAAAAACTAGTGCTAGAGCTCCCCAGAAACAGCATCCTAGGACATCTGGGATCCAAACAGTAGAGGCAAGAGACATCAAATCTTCTAAGACAGGCAAATCTGAACTGGCTGCGCCAGAAGATTTATCGAAATCTGTTCAGGACACATTGAAGCAGTACACTGGAGACACTTCTGAAAACAAGAAGCTAGGAATTTCAAACCCAAAGGAGTCAGCCGATTCCCTGATTAGTAAATTTGGTTCTTCTGTTTCCTTGTCTGTTAATGAACAACTATCTGGAGGAGTTGACCACGTTGTTAATGGAAATAGAAGTAGCTCTATTGATCAAGAAAAGAAAACATCAGAATATGGAAGCGTGAAGAGTAGTTCTGTATCTGCTAAAGTAAGTGATGGGGCCAGCAGCCTGGCAAAGACCAGTGGAAGTGCCAAGATTAGTGATAGAGCTGATCTTGTTGAGAGTGGCAAAAGCAGCATTTGCAGAGGAAGTACAAGTAGTGATGTGAGTGATGAGAGCACTTGCAGCAGTTTTAGTAGCAGTGTCAACAAGCCTCACAAGGCAAATGACTTGAGATGGGAGGCTATTCAAGCTGTCCGGGCTAAAGATGGGGTTTTGGGCTTAGCTCACTTTAGACTATTGAAGAGGTTGGGTTGTGGGGATATTGGGAGTGTGTATCTCTCAGAGTTGAGTGGAACTAAATGTTATTTTGCAATGAAGGTAATGGATAAAGGGTCTTTAGCAAGTCGTAAAAAGCTGCTTCGTGCTCAGACTGAAAGAGAAATACTGCAATCACTTGACCATCCATTTCTCCCAACGTTGTATACACATTTTGAGACAGAGAAGTTCTCGTGCTTGGTAATGGAATTCTGCCCAGGTGGAGACCTGCACACTCTCAGGCAGAGGCAGCCAGGCAAGCATTTTCCTGAGCAAGCAGTAAAATTTTATGTGGCAGAGGTGCTGCTGGCGTTAGAGTATCTCCACATGCTTGGCATTGTCTACCGTGATCTCAAGCCAGAAAATGTCCTTGTTAGGGATGATGGACATATTATGCTTTCAGACTTTGACCTTTCCCTCCGATGTGCTGTTAGCCCAACACTTGTTAAAGGTTCTGTCATGGAATCTGATCCTTTAAGAAAGAATCCTGTGTATTGTGTGCAGCCTGCTTGTATTGAACCGCCTTCCTGCATCCAGCCATCCTGTGTTGCTCCTACAACATGCTTTTCACCTCGGCTCTTTTCTAGCAAATCAAAGAAGGATCGGAAACCCAAAACTGAAATTGGAAACCAAGTGACTCCATTACCCGAGCTCATTGCTGAGCCCACCGATGCACGATCTATGTCATTTGTTGGAACCCATGAATACTTGGCACCTGAGATCATCAAGGGAGAAGGTCATGGGAGTGCAGTTGATTGGTGGACTTTTGGGATATTTCTATATGAGCTTTTGTTTGGTAAGACTCCTTTCAAGGGTTCTGGGAACCGGGCTACATTGTTTAATGTTGTAGGCCAGCCTCTTCGATTTCCAGAGGCACCTGTTGTAAGTTTCGCAGCAAGGGATCTCATAAGGGGGTTGCTTGTGAAGGAACCACAGCACAGGTTGGCATATAAACGAGGCGCCACTGAGATAAAGCAACATCCGTTTTTCGAAGGTGTGAATTGGGCACTTATTCGCTGCGCTACCCCACCAGAGATCCCAAAGCCTGTAGAGTATGAGAAGATACCTTCCCCAGCCTCTTCAGCTGGCGAAAAGGCTGGCAACCATATGTCAATTCCGGATCAGAAAGGTTCTGGTAATTATCTTGAGTTTGATTTCTTCTAG 1821 0.4492 MDSKTSARAPQKQHPRTSGIQTVEARDIKSSKTGKSELAAPEDLSKSVQDTLKQYTGDTSENKKLGISNPKESADSLISKFGSSVSLSVNEQLSGGVDHVVNGNRSSSIDQEKKTSEYGSVKSSSVSAKVSDGASSLAKTSGSAKISDRADLVESGKSSICRGSTSSDVSDESTCSSFSSSVNKPHKANDLRWEAIQAVRAKDGVLGLAHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKGSVMESDPLRKNPVYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKTEIGNQVTPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEYEKIPSPASSAGEKAGNHMSIPDQKGSGNYLEFDFF 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1588 606 MobiDBLite consensus disorder prediction 10 27 - -
Prci11g1588 606 SUPERFAMILY Protein kinase-like (PK-like) 189 574 IPR011009 -
Prci11g1588 606 SMART serkin_6 211 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1588 606 FunFam Serine/threonine-protein kinase D6PK-like 209 294 - -
Prci11g1588 606 MobiDBLite consensus disorder prediction 1 73 - -
Prci11g1588 606 ProSiteProfiles Protein kinase domain profile. 211 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1588 606 MobiDBLite consensus disorder prediction 47 73 - -
Prci11g1588 606 CDD STKc_phototropin_like 210 568 - -
Prci11g1588 606 Gene3D Transferase(Phosphotransferase) domain 1 443 567 - -
Prci11g1588 606 FunFam Serine/threonine-protein kinase AGC1-7 442 567 - -
Prci11g1588 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 332 344 IPR008271 GO:0004672|GO:0006468
Prci11g1588 606 MobiDBLite consensus disorder prediction 96 125 - -
Prci11g1588 606 FunFam serine/threonine-protein kinase D6PK-like 295 362 - -
Prci11g1588 606 MobiDBLite consensus disorder prediction 158 179 - -
Prci11g1588 606 Gene3D Phosphorylase Kinase; domain 1 209 294 - -
Prci11g1588 606 Gene3D Transferase(Phosphotransferase) domain 1 295 362 - -
Prci11g1588 606 PANTHER FLIPPASE KINASE 1-RELATED 34 573 - -
Prci11g1588 606 Pfam Protein kinase domain 446 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1588 606 Pfam Protein kinase domain 212 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1588 Prci-Chr11 13487696 13491168 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1588 34 606 AGC Kinase Gene Family AT5G47750 78.609 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Prci11g1588 Pkinase 2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1588 K08286 - gmx:100781600 996.882