Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1577 ATGGACGACCTTTTCACCGTCGGCGATTTCCCTTACCACGTGGCTCCATTTCCCGATACCTCTGACCTTCTTTACACCCATCCCACGCCGTCTTTTCACCATTCTGACGTCACCGACCATCGTCGGCTTCCCAATCCCCCGCCGCAGAAGCTCCGGCCCATCCGGAGCCTCGACCGGTCTTCTTCGCCGCCATCGCTGCTCGTAGAGATTCCTGAGAATGGAGGGCTCGCCGGAACGTCTCACGATGTGGGTTACCCTTGTCAACAGCCAAGTCAGAACCTTGTGTTGCTGGATCGGCAAGTTGAGTCTTGCGAGGAGCTGAGGAAGGAAGCTTCCGATGACGGTGCGGGAAATGATTGCCTTCAGACGGATACTCCGGCAGGGCTCGGGCCGAGTCATAGTTGTGAGTTGAAGCAGGAATCTGGTTCATCTTGGGAAGATGACGGTGATGATGATTCATCTGAAAGTGTGGAAGATCGTGGGTATGGAAAGAAAAGGAAAAAGACGATTGCCAAGTTTGAAGCTTTTCTGGAAAATTTGGTGACGAAGGTGATGGAAAAGCAAGAAAAGATGCATCAGCAACTGCTGGACATGATAGAAAATAAGGAAAGGGAAAGAGCAGTGAGGGAAGAAGCTTGGAAGCAAAAGGAGATGGTAAGAATTAAAAAGGATGAGGAGGCCAGAGCTCAAGAAAAATATAATAACCTAGCACTCATATCATTGATTCAGAATCTACTGGGCCATGAAATTCAAATCCCCCAACCAGCAGCAACCAGTGCAAGAGACGATGATGAAGGCGAAGGCGAAGCCAACGTCCCAAAAGATTTCAAGAGTGATCAGAGTAACAACAGATGGCCGGAAGCTGAAGTACAAGCTCTCGTAACTCTCAGGACTTGTTCAGAGCACAAGTTTCAAGGTATAGGATCCAAAGTATCTGTGTGGGAAGAAATATCTAAAGCAATGAACAATATGGGTTACAATCGCTCTGCAAAGAAGTGCAAGGAGAAATGGGAAAACATCAACAAGTACTATAAGAGAACGATGGAGAGTAGGAAGAAGAAGCGACGTCTAAATAATAAAGCTTGCCCATACTTTGATGAGCTTGACATTCTGTACCGAAATCGGCTGCCTCATATTGGGAATGCCTTTAGCGATACCTCAATGTCCTCAAAGACTGAAAAGTAA 1185 0.4734 MDDLFTVGDFPYHVAPFPDTSDLLYTHPTPSFHHSDVTDHRRLPNPPPQKLRPIRSLDRSSSPPSLLVEIPENGGLAGTSHDVGYPCQQPSQNLVLLDRQVESCEELRKEASDDGAGNDCLQTDTPAGLGPSHSCELKQESGSSWEDDGDDDSSESVEDRGYGKKRKKTIAKFEAFLENLVTKVMEKQEKMHQQLLDMIENKERERAVREEAWKQKEMVRIKKDEEARAQEKYNNLALISLIQNLLGHEIQIPQPAATSARDDDEGEGEANVPKDFKSDQSNNRWPEAEVQALVTLRTCSEHKFQGIGSKVSVWEEISKAMNNMGYNRSAKKCKEKWENINKYYKRTMESRKKKRRLNNKACPYFDELDILYRNRLPHIGNAFSDTSMSSKTEK 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1577 394 MobiDBLite consensus disorder prediction 255 284 - -
Prci11g1577 394 MobiDBLite consensus disorder prediction 107 164 - -
Prci11g1577 394 MobiDBLite consensus disorder prediction 32 65 - -
Prci11g1577 394 SUPERFAMILY Homeodomain-like 282 356 IPR009057 -
Prci11g1577 394 ProSiteProfiles Myb-like domain profile. 277 341 IPR001005 -
Prci11g1577 394 MobiDBLite consensus disorder prediction 260 274 - -
Prci11g1577 394 FunFam Trihelix transcription factor GT-2 285 346 - -
Prci11g1577 394 Pfam Myb/SANT-like DNA-binding domain 283 369 IPR044822 -
Prci11g1577 394 CDD GT1 283 347 - -
Prci11g1577 394 PANTHER FI21293P1 127 381 - -
Prci11g1577 394 Coils Coil 185 205 - -
Prci11g1577 394 Gene3D - 285 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1577 Prci-Chr11 13395303 13397665 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1577 163 374 Trihelix Transcription Factor Family AT5G47660 43.363 1.39e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci11g1577 Myb_DNA-bind_4 5.9e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1577 - - pcin:129285231 766.533