Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1568 ATGGGGAATGTGAATGGGAGAGAAGATGGGAATGGAAGTCCCTCAGGGGCAGAAGAAGAAGGTGGAGGCAGTGGCAGTGTCCAGGAGGCCATTTCCGCTTCGAATAATGTGTCTTCTGAATTGATGGGTCAATCACCCCCAACAAGCCCTAGAGCTACCCAATCTCCGTTGATGTTCACTCCGCAAGTTCCAGCAGTTCCACTCCAAAGACCTGATGAGATGCAAGCTCCAAGTCATGCTTGGATGCAAGCTTCTTCAGCATATGACGATATGAGCAATGAACAAGGAATTCCAACGATGATTACTTGGAGTTATGATGGGAAAGAAGTAGCTGTGGAGGGATCATGGGATAATTGGAGAATGAGAATGCCCATGCAAAGATCCGGGAAAGACTTCACTATAATGAAGGTATTGCCATCTGGTGTTTACCAGTACAGGTTCCTAGTTGATGGACAGTGGAGGTATGCTCCTGACTTGCCCTGGGCTCAAGATGATGCTGGCAATGCCTACAACATTTTAGACTTACAGGATTATGTTCCTGAAGACATTGGAAGCATTTCTGGTTTTGAACCTCCTCAATCACCAGAATCAAGTTATGACAATCTACAACTTGGTTCTGAAGATTATGCAAAGGAGCCTCCATTAGTTCCGCCGCACCTGCAAATGACACTGCTTAATGTGCCTGCTACAAACATGGAGATTCCACCTCCTTTGTCAAGACCTCAACATGTAGTGGCTAATCATCTCTACATGCAAAAGGGAAAAAACCAGTCCCAGTGGTTTGCGCTTGGTACATCGCATCGGTTTCTTGCCAAATATGATGTGGTGCTGTACAAGTCTTTGCAGAGGTAA 852 0.4589 MGNVNGREDGNGSPSGAEEEGGGSGSVQEAISASNNVSSELMGQSPPTSPRATQSPLMFTPQVPAVPLQRPDEMQAPSHAWMQASSAYDDMSNEQGIPTMITWSYDGKEVAVEGSWDNWRMRMPMQRSGKDFTIMKVLPSGVYQYRFLVDGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIGSISGFEPPQSPESSYDNLQLGSEDYAKEPPLVPPHLQMTLLNVPATNMEIPPPLSRPQHVVANHLYMQKGKNQSQWFALGTSHRFLAKYVXVVLYKSLQR 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1568 284 CDD E_set_AMPKbeta_like_N 98 174 - -
Prci11g1568 284 MobiDBLite consensus disorder prediction 1 68 - -
Prci11g1568 284 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 210 280 IPR006828 GO:0005515
Prci11g1568 284 SUPERFAMILY AMPKBI-like 179 281 IPR037256 -
Prci11g1568 284 Gene3D Immunoglobulins 89 179 IPR013783 -
Prci11g1568 284 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 284 IPR043554 -
Prci11g1568 284 Pfam Glycogen recognition site of AMP-activated protein kinase 97 176 IPR032640 -
Prci11g1568 284 SUPERFAMILY E set domains 96 182 IPR014756 -
Prci11g1568 284 Gene3D - 187 282 - -
Prci11g1568 284 SMART AMPKBI_2 192 282 IPR006828 GO:0005515
Prci11g1568 284 MobiDBLite consensus disorder prediction 27 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1568 Prci-Chr11 13330763 13335245 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1568 63 177 Protein tyrosine phosphatase (PTP) family AT3G01510 28.689 2.11e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1568 K07199 - qsa:O6P43_031379 475.322