Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1544 ATGCAAACGACGCAGAAACACCCTAGTTCAGTTGGTTTCCATCTGTATCACCAGCCGATGCAGAGCACAAACAAATACCATTTGTCTCCTTTCCAGATTTTGCCAAGCAATTCATATAATGAAATCCTTGGTGATAGCAGCCAGGGAACCACAGTTTCTTTTGAAAACTGCAACCAGCAATACTTTACTCTTGAATCATCCCTACCACCTCCTGGTCCCATAGCTTGTGATTCGTCTTCCTTTGCTAGCAATTCATCTAACAGGAGTCCTTTTTCTCCGCAAGGTTCTCAGACTCAGTCATCCCTTTCAGATCAGCTCCTATCCGTGGACAACATCTATGGATCGCCAACTAGTGGGTGCTCTAGTGTTGATGGTGGCAATGAATGGAAGTACAGACTTAAGGAAATAGCGAACGAATTGTTGGGACCTGAGTCAGATATTGTTGACAGCTGTGACTGCTGCCCTGAAGGCGGCCACCACCTAACATCTCCGATGTCTGTATGGAATTGGGATCAGATTGTAGAAAAGATTCCCAATTTAGACTTGAGAGCTGTCCTCACTGCTTGTGCACAAGCTGTGTCCGAGGGAGATTTTCAAAAAGCAGCAGGATGGATGGATAAAGTATTGGTGAAGATGGTGTCAGTTTCTGGGGATCCAATTCAGAGGTTGGGAGCTTATATGTTGGAGGGGCTTAGAGCGAGGGTGGTATCATCAGGGAGTTCAATCTACAAATCTTTGAAGTGTGAACAAGAACAGCCGCCAACAAGCAAAGAACTTATGAATTACATGGGCATCCTCTATAGGATTTGCCCATACTGGCCGTTTGCTTACACGTCTGCAAATGCTGTCATCCAGGAAGCAATGCAAAATGAATCCAGAATTCATATAATTGACTTCCAAATCGCACAGGGCACCCAGTGGAAGTTACTGATTCAGGCTCTTGCACAGCGGCCTGGGGGCCCCCCATACATTCGTGTAACCGGCGTTGACGATTCCCAATCATTTCATGCTCGAGGCGGAGGGCTTCATATTGTAGGACAACATTTGGCGAATCATGCCAAGTCTCTTGGAGTGCCGTTTGAGTTCCATAGTGCTGCCATGTCAGGCTGCAAGGTTCAACTTGAGGACCTTGGAGTTCGACCTGGGGAAGCTGTGGCTGTGAATTTTCCTTATGTTCTGCACCACATGCCAGATGAGAGTGTTAGCACAGAGAACCATAGAGACAGGTTATTGAGATTGGTCAAGAGCTTGTCTCCCAAAGTAATGACCCTTGTTGAGCAAGAATCCAACACCAACACTTCCCCCTTTTACCAAAGGTTTGTCGAGACACTGAGTTATTACTCAGCTATGTTTGAATCAATTGATGCGGCCAGCTCTAGCAGAGACGATAAGGAGCGGATTAATGCAGAGCAGCACTGTGTGGCTCGAGACATTGTCAACATGATAGCTTGTGAGGGGCCGGAGAGGGTGGAAAGGCATGAACTGCTAGGAAAGTGGAGGTCAAGACTTTTCATGGCCGGTTTTAAACAACACCCGTTGAGTGCCTCGACTGCAGCTGCAGTCAGAAATTTATTGAAGGGTTTCAATGAAAAGTATAGGCTTGACTACAGGGATGGTGCGCTCTATCTTTTTTGGATGGACAGAGCTATGGCCACCTCCTCCGCTTGGTGGTGA 1674 0.4683 MQTTQKHPSSVGFHLYHQPMQSTNKYHLSPFQILPSNSYNEILGDSSQGTTVSFENCNQQYFTLESSLPPPGPIACDSSSFASNSSNRSPFSPQGSQTQSSLSDQLLSVDNIYGSPTSGCSSVDGGNEWKYRLKEIANELLGPESDIVDSCDCCPEGGHHLTSPMSVWNWDQIVEKIPNLDLRAVLTACAQAVSEGDFQKAAGWMDKVLVKMVSVSGDPIQRLGAYMLEGLRARVVSSGSSIYKSLKCEQEQPPTSKELMNYMGILYRICPYWPFAYTSANAVIQEAMQNESRIHIIDFQIAQGTQWKLLIQALAQRPGGPPYIRVTGVDDSQSFHARGGGLHIVGQHLANHAKSLGVPFEFHSAAMSGCKVQLEDLGVRPGEAVAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVMTLVEQESNTNTSPFYQRFVETLSYYSAMFESIDAASSSRDDKERINAEQHCVARDIVNMIACEGPERVERHELLGKWRSRLFMAGFKQHPLSASTAAAVRNLLKGFNEKYRLDYRDGALYLFWMDRAMATSSAWW 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1544 557 ProSiteProfiles GRAS family profile. 173 557 IPR005202 -
Prci11g1544 557 MobiDBLite consensus disorder prediction 77 100 - -
Prci11g1544 557 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 115 547 IPR005202 -
Prci11g1544 557 MobiDBLite consensus disorder prediction 75 100 - -
Prci11g1544 557 Pfam GRAS domain family 182 556 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1544 Prci-Chr11 13088140 13091483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1544 1 556 GRAS Transcription Factor Family AT4G17230 57.321 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci11g1544 GRAS 5.9e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1544 - - gmx:100819190 755.747