Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1494 ATGACGTTGGATATCACCAACGGCGAGTTGTTGCGCATGGCGAGCGAGGCTTCCGAATCCTTCGCCGGCGGTATTTTGCAGCAGCGGGCGCCTGTCGAGAACGGAGACGGTACCGGAACGGGTGGGGAGGAGATGTTGATGCCTCCTCTCAACTTCGGGATGGTCGATTATGGCATTTTTCGATCTGGCTTTCCTGATTCTGCCAGTTTCGGATTCTTGAAAACCCTTCGCCTACGTTCCATTATATGTTTGTTCCCTGATGAGTATCCAGAAACCAATTTAGAGTTTTTGAAGGCCAATGGAATAAGGCTTTATCAATTTGGAATCGATGGCTCTAAGGATTCTTTGACGGAAGTCCCGGAAGATGCAATTCGTGAGGCATTGAAAGTTATACTAGATGTTGAGAACCATCCATTGCTCATTCATTGCAAAAGAGGGAAGCACCGCACTGGGTGTCTTGTGGGATGCTTAAGAAGATTGCAAAGATGGTGTCTATCATCCATTTTGGATGAGTATCGAAGTTTTGCAGCTGCCAAAGCCAGAGTGTCAGATCAGAGTTTCATAGAATTGTTTGATATTTCTGGTTTTAAACCCCAGCCACCGTCATTTTCATCCGCACAAAAACACAGTATTGACAAATTTCAGGATGGTGTTCCATCCTCCCCTGAATATTACAGCGAAGCACTGTGA 690 0.4609 MTLDITNGELLRMASEASESFAGGILQQRAPVENGDGTGTGGEEMLMPPLNFGMVDYGIFRSGFPDSASFGFLKTLRLRSIICLFPDEYPETNLEFLKANGIRLYQFGIDGSKDSLTEVPEDAIREALKVILDVENHPLLIHCKRGKHRTGCLVGCLRRLQRWCLSSILDEYRSFAAAKARVSDQSFIELFDISGFKPQPPSFSSAQKHSIDKFQDGVPSSPEYYSEAL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1494 229 MobiDBLite consensus disorder prediction 201 229 - -
Prci11g1494 229 PRINTS Plant and fungal dual specificity phosphatase signature 83 96 IPR020428 GO:0016791
Prci11g1494 229 PRINTS Plant and fungal dual specificity phosphatase signature 46 63 IPR020428 GO:0016791
Prci11g1494 229 PRINTS Plant and fungal dual specificity phosphatase signature 102 116 IPR020428 GO:0016791
Prci11g1494 229 PRINTS Plant and fungal dual specificity phosphatase signature 119 133 IPR020428 GO:0016791
Prci11g1494 229 ProSitePatterns Tyrosine specific protein phosphatases active site. 141 151 IPR016130 GO:0016311|GO:0016791
Prci11g1494 229 CDD PFA-DSP_Siw14 45 192 - -
Prci11g1494 229 Gene3D Protein tyrosine phosphatase superfamily 45 195 IPR029021 -
Prci11g1494 229 PANTHER TYROSINE-PROTEIN PHOSPHATASE 45 197 - -
Prci11g1494 229 MobiDBLite consensus disorder prediction 25 45 - -
Prci11g1494 229 FunFam probable tyrosine-protein phosphatase At1g05000 45 195 - -
Prci11g1494 229 ProSiteProfiles Dual specificity protein phosphatase domain profile. 51 200 IPR020422 GO:0006470|GO:0008138
Prci11g1494 229 Pfam Tyrosine phosphatase family 46 200 IPR004861 -
Prci11g1494 229 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 46 193 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1494 Prci-Chr11 12651208 12654437 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1494 19 210 Protein tyrosine phosphatase (PTP) family AT4G03960 59.375 6.13e-85 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1494 K18045 - qsa:O6P43_031297 271.552