Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1493 ATGACGTTGGATATCACCAACGGCGAGTTGTTGCGCATGGCGAGCGAGGCTTCCGAATCCTTCGCCGGCGGTATTTTGCAGCAGCGGGCGCCTGTCGAGAACGGAGACGGTACCGGAACGGGTGGGGAGGAGATGTTGATGCCTCCTCTCAACTTCGGGATGGTCGATTATGGCATTTTTCGATCTGGCTTTCCTGATTCTGCCAGTTTCGGATTCTTGAAAACCCTTCGCCTACGTTCCATTATATGTTTGTTCCCTGATGAGTATCCAGAAACCAATTTAGAGTTTTTGAAGGCCAATGGAATAAGGCTTTATCAATTTGGAATCGATGGCTCTAAGGATTCTTTGACGGAAGTCCCGGAAGATGCAATTCGTGAGGCATTGAAAGTTATACTAGATGTTGAGAACCATCCATTGCTCATTCATTGCAAAAGAGGGAAGGGTTGCTCTTCGATCACTTATCTTCTGATCAATGTTGATGGTTGCACACTCTCTTGCTCTCTTGCTTTGGACGCAAAGCATCCTTTAATTTGCGAGTTTGTCTCAGCTTCTTCCATTGTCGCAAGCTTCCTTCGATTGTGCAACGCTTTGTGTCATCTGCAACTTTAA 609 0.4663 MTLDITNGELLRMASEASESFAGGILQQRAPVENGDGTGTGGEEMLMPPLNFGMVDYGIFRSGFPDSASFGFLKTLRLRSIICLFPDEYPETNLEFLKANGIRLYQFGIDGSKDSLTEVPEDAIREALKVILDVENHPLLIHCKRGKGCSSITYLLINVDGCTLSCSLALDAKHPLICEFVSASSIVASFLRLCNALCHLQL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1493 202 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 46 151 IPR029021 -
Prci11g1493 202 Gene3D Protein tyrosine phosphatase superfamily 45 174 IPR029021 -
Prci11g1493 202 Pfam Tyrosine phosphatase family 46 148 IPR004861 -
Prci11g1493 202 PRINTS Plant and fungal dual specificity phosphatase signature 102 116 IPR020428 GO:0016791
Prci11g1493 202 PRINTS Plant and fungal dual specificity phosphatase signature 83 96 IPR020428 GO:0016791
Prci11g1493 202 PRINTS Plant and fungal dual specificity phosphatase signature 119 133 IPR020428 GO:0016791
Prci11g1493 202 PRINTS Plant and fungal dual specificity phosphatase signature 46 63 IPR020428 GO:0016791
Prci11g1493 202 PANTHER TYROSINE-PROTEIN PHOSPHATASE 45 153 - -
Prci11g1493 202 MobiDBLite consensus disorder prediction 25 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1493 Prci-Chr11 12650282 12654437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1493 19 149 Protein tyrosine phosphatase (PTP) family AT4G03960 54.478 9.01e-48 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1493 K18045 - qsa:O6P43_031297 180.644