Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1491 ATGGGGAAATCCGGGGGTAGAAAAAAGAAGGGTGGTTCAAATCAAGTTGTTGCTGATAATTCAGCTCCAAGTTCTAATGGTGGTGTGGATTTAGACTCTTCAATCTTTTTGAAAAGAGCCCTTGAGCTCAAGGAAGAAGGGAATAAGAGATTTCAGAATAAGGACTATGCTGGTGCTCTTGAGCAGTATGAGAATGCTCTTCGACTTACCCCCAAGACTCACCCTGAGAGAGCGGTCTTTCACAGCAATAGGGCAGCATGCTTGATGCAAATGAAGCCCATAGATTATGAAACTGTGATTGCTGAATGCACCATGGCATTGCAGGTCCAGCCCCAATATGTCCGGGCACTTCTTCGGAGGGCTCGGGCATTTGAGGCTATAGGTAAGTATGAAATGGCCATGCAGGATGTACAAGGGTTACTGGCAGCGGACCCTAACCATCGGGATGCTCTGGAGATTGCCCAGAGACTGAGGACAGCACTAGGTCCTCGCCAGGAAGCCCAGCAGGATCTTCAGAGTCGGCCCTCCCCTGCTGCCCTTGGTGCTTCTGCAGTTCGTGGTGCCCCTATTGCTGGTCTAGGGCCATGTTTACCGGCCCGGCCGGTACCAAAGAAGGCGGCTAACTCAGCAGTTGGATCAGTTGCTCCTGCTAACAGTAAGACAGAGAAGTCCCAGCCACCTTTATTTACTGAAAATGGTCCTGAGACCAAGTCACAAATGCCAAAAGTTGTGTTGAAGCCTTCAAGTGCTTCAGCAAGATCACCAAATTCAAGAAAAGAGAACCACAATGAACTTTCATCATATTCATCAATTACACATGGACAGCATTTAGATGTTGCAATTCGATGGAGGCCATTGAAACTTATTTATGATCATGACATTAGGCTTGCTCAGATGCCAGTTAATTGCAATTTTAGAACGCTAAGAGATACAGTGAGTAAAAGATTTCCATCATCAAAGTCAGTTCTGATCAAGTATAAGGATAGTGATGGTGATTTGGTGACAATAACATCTACTGATGAGCTTAGACTGGCAGAATCTTGTGCTGATAGCCATCTTGTGAAAGAGCCTGAGGCAGATGTAAGTGATTCAGTTGCCATATTGAGACTTCATGTTGTTGAAGTTAGTCCTGAGCAGGAGCCTCCTTTACTGGAAGAAGAGGAAGTAAAACCTGAGAATGAAGGCATCAAGGGAGATGAGAGTGGTTCACATACTTCTCACAGTGAATCTGTCCCAGAGGCTCCAGAGCCTGAGGTCGATAAGATAGGGAAAGAAGCTCCGAAGGGGAGACCAACTACTACAGAAGATGCTGAATGCAAGGAAGTGGAAATGGATGATTGGTTGTTTGAATTTGCTCAGCTTTTCCGCTCTCATGTGGGTATTGATCCAGATGCTCATATTGACTTGCATGAGCTGGGGATGGAGCTTTGTTCAGAGGCGCTGGAGGAAACAATAACTAGTGAGGAGGCTCAAGATCTCTTTGACAAAGCCGCTTCAAAGTTCCAAGAGGTAGCTGCTTTGGCATTCTTCAATTGGGGAAACATTCACATGTGTGCAGCTAGAAAACGAATTCCCTTAGATGAGTCAGGTGAAAAGGACAAAGTGGCAGAACAGCTTCAAGTGGCTTATGAGTGGGTCAAGGAAAAATATTCATTGGCAAGAAAGAAGTATGAGGAAGCCCTTTTAATAAAACCAGACTTCTATGAGGGATTGCTGGCTCTGGGACAGCAACAATTTGAAATGGCCAAACTTAATTGGTCATTTGCTCTTGCTAAGAAGATGGACTTATCATCCTGGGATTCTTCTGAAACACTTCAACTTTTTGTTAGTGCAGAGGAGAAGATGAAAGCTGCAACTGATATGTGGGAAAAGCTGGAGGCACAGAGAGCAAATGAGCTAAAAGATCCTAGTGCAAGCAAGAAAGAGGAACTACTGAGAAGAAGGAAAAAACAGGGAGGTGGTACTGAAGGCGAGACATCTGCAGTTGGTGTCCATTGTGATATATCTGCAGAAGAAGCTGCAGAGCAAGCAGCTGTCATGAGATCACAGATTCACCTCTTCTGGGGGAATATGCTATTTGAAAGATCCCAAGTTGAATGCAAGCTAGGGATGGGTGGTTGGAAGAAAAATCTGGATACTGCCGTGGAGCGCTTTAAGCTTGCAGGAGCTTCTGAGGCTGACATTTCCTTGGTTCTGAAGAATCATTGCTCTAATGGGGATGCAAAGGAAGGAGATGAGAAAAAGATTCAGAATCCTCAACCCAGCAAGACCGGCGAAACTGACAAGACCAGTGAGACCAGTCATGCATGA 2310 0.4541 MGKSGGRKKKGGSNQVVADNSAPSSNGGVDLDSSIFLKRALELKEEGNKRFQNKDYAGALEQYENALRLTPKTHPERAVFHSNRAACLMQMKPIDYETVIAECTMALQVQPQYVRALLRRARAFEAIGKYEMAMQDVQGLLAADPNHRDALEIAQRLRTALGPRQEAQQDLQSRPSPAALGASAVRGAPIAGLGPCLPARPVPKKAANSAVGSVAPANSKTEKSQPPLFTENGPETKSQMPKVVLKPSSASARSPNSRKENHNELSSYSSITHGQHLDVAIRWRPLKLIYDHDIRLAQMPVNCNFRTLRDTVSKRFPSSKSVLIKYKDSDGDLVTITSTDELRLAESCADSHLVKEPEADVSDSVAILRLHVVEVSPEQEPPLLEEEEVKPENEGIKGDESGSHTSHSESVPEAPEPEVDKIGKEAPKGRPTTTEDAECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETITSEEAQDLFDKAASKFQEVAALAFFNWGNIHMCAARKRIPLDESGEKDKVAEQLQVAYEWVKEKYSLARKKYEEALLIKPDFYEGLLALGQQQFEMAKLNWSFALAKKMDLSSWDSSETLQLFVSAEEKMKAATDMWEKLEAQRANELKDPSASKKEELLRRRKKQGGGTEGETSAVGVHCDISAEEAAEQAAVMRSQIHLFWGNMLFERSQVECKLGMGGWKKNLDTAVERFKLAGASEADISLVLKNHCSNGDAKEGDEKKIQNPQPSKTGETDKTSETSHA 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1491 769 MobiDBLite consensus disorder prediction 736 769 - -
Prci11g1491 769 MobiDBLite consensus disorder prediction 1 29 - -
Prci11g1491 769 MobiDBLite consensus disorder prediction 738 752 - -
Prci11g1491 769 MobiDBLite consensus disorder prediction 629 654 - -
Prci11g1491 769 Gene3D Tetratricopeptide repeat domain 37 169 IPR011990 GO:0005515
Prci11g1491 769 SMART PB1_new 283 375 IPR000270 GO:0005515
Prci11g1491 769 Gene3D Tetratricopeptide repeat domain 447 665 IPR011990 GO:0005515
Prci11g1491 769 SUPERFAMILY TPR-like 38 171 IPR011990 GO:0005515
Prci11g1491 769 MobiDBLite consensus disorder prediction 629 660 - -
Prci11g1491 769 ProSiteProfiles PB1 domain profile. 283 375 IPR000270 GO:0005515
Prci11g1491 769 MobiDBLite consensus disorder prediction 208 267 - -
Prci11g1491 769 CDD PB1 286 372 - -
Prci11g1491 769 ProSiteProfiles TPR repeat profile. 114 147 IPR019734 GO:0005515
Prci11g1491 769 PANTHER PROTEIN CLMP1 1 753 IPR044517 -
Prci11g1491 769 Gene3D - 285 355 - -
Prci11g1491 769 Coils Coil 608 628 - -
Prci11g1491 769 MobiDBLite consensus disorder prediction 212 267 - -
Prci11g1491 769 SUPERFAMILY TPR-like 488 585 IPR011990 GO:0005515
Prci11g1491 769 SMART tpr_5 40 73 IPR019734 GO:0005515
Prci11g1491 769 SMART tpr_5 78 113 IPR019734 GO:0005515
Prci11g1491 769 SMART tpr_5 114 147 IPR019734 GO:0005515
Prci11g1491 769 MobiDBLite consensus disorder prediction 378 437 - -
Prci11g1491 769 ProSiteProfiles TPR repeat profile. 40 73 IPR019734 GO:0005515
Prci11g1491 769 Pfam PB1 domain 283 374 IPR000270 GO:0005515
Prci11g1491 769 SUPERFAMILY CAD & PB1 domains 281 353 - -
Prci11g1491 769 MobiDBLite consensus disorder prediction 383 437 - -
Prci11g1491 769 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1491 Prci-Chr11 12646383 12649518 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1491 30 161 Calmodulin-binding Proteins AT3G25230 27.972 1.48e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1491 K26538 - gmx:100786963 1172.53