Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1487 ATGAGTCAGCTTGGGGTGATATTGCAGGAATCGCTTCGGAGAGAGCGGGAGGAAAGAACGATTCTGGGTTTATTAACGGAGCACATGGATTCGGTGAACAGGGATGATAATAATGATGGAGAGCCCCGAAGGAGACGGAGCTTGAAAGAACGGCTAAGATTTACCGGAATGGGGTGCTGTGGGGCCACCTGGGGTTTCCGTCCGACCACCGTAAGGGACGAAGGAGGAGGAGAAGACGAAGACGAACGGCGGCAGCAGCAGCAAAGGCTCCAAGAGCAGAATCCGGGTCAAAGATCGAGCTCTGCAGACCCGGATTGTTTGAGCCCGAACCCGTCAGGTTCGGGTATGAATCTTGCGGCGGCGTTGGCAGCGGAACGTCAATTTAGGGGGTCGCAAGAAGCGGCGGAGACAGGAAGGCAAGGAGTCATGGGGAACAATTTCCGGCGTGGAAGTGCGGGAGCGGCGCCTGGGACGCCGTGGAGGGTGTCGCTGATGAGGCTGCTAGAGGAGAGTGAGGGAGGTGAGGCGGAGGTGACGGGGAAGGTGACTGAAAACGGAGAAGGGGGAAATGATACGGTGTGCTGCGTGTGCATGGGAAGGAAGAAAGGAGCGGCATTTATCCCATGTGGGCATACCTTTTGCAGAGTGTGCTCCAGAGAGCTGTGGCTCAATCGAGGGACCTGTCCCCTCTGTAACCGTTCGATCCTCGAGATTCTCGACATCTTCTGA 729 0.5665 MSQLGVILQESLRREREERTILGLLTEHMDSVNRDDNNDGEPRRRRSLKERLRFTGMGCCGATWGFRPTTVRDEGGGEDEDERRQQQQRLQEQNPGQRSSSADPDCLSPNPSGSGMNLAAALAAERQFRGSQEAAETGRQGVMGNNFRRGSAGAAPGTPWRVSLMRLLEESEGGEAEVTGKVTENGEGGNDTVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1487 242 MobiDBLite consensus disorder prediction 65 155 - -
Prci11g1487 242 Pfam Zinc finger, C3HC4 type (RING finger) 191 236 - -
Prci11g1487 242 MobiDBLite consensus disorder prediction 89 115 - -
Prci11g1487 242 PANTHER OS01G0917900 PROTEIN 5 242 - -
Prci11g1487 242 CDD RING-HC 194 231 - -
Prci11g1487 242 SMART ring_2 194 231 IPR001841 -
Prci11g1487 242 MobiDBLite consensus disorder prediction 72 88 - -
Prci11g1487 242 ProSiteProfiles Zinc finger RING-type profile. 194 232 IPR001841 -
Prci11g1487 242 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 189 241 IPR013083 -
Prci11g1487 242 SUPERFAMILY RING/U-box 185 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1487 Prci-Chr11 12603940 12605282 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1487 29 242 C3H Transcription Factor Family AT4G22250 49.327 3.28e-58 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1487 - - pcin:129286609 448.743