Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1463 ATGAGAAGGGATAGATTAAGCTATGTCCCTTGCACCAAATGCGAACAAAAATTATACTGTGACAAGTGCATCAAGCAATGGTATCCTGATATGACGGTAGCAGAAATTGCAGAGCGTTGCCCATTTTGCCGTAAAAATTGCAATTGCAATGTCTGCTTGCGCTCAAGTGGGATGATCAAGACATCTATCAGGGATATCTCTGATAATGAGAAGTTTCAATATCTGCAATATTGTATCAACTTGGTTCGTCCATTTCTGAAACAAATGTGTGAAGAACAAGCTCTAGAGGAAGAGATTGAAGCTAGAATACAAGGAACATCACGTTCTGAGATTAGGATACTGCAAACTCTATGCAGTGATGATGAACGTGTCTATTGCAACCATTGTGCTACTTCAATTGTTGATCTTCATCGAAGCTGCCCTGTGTGTTCCTATGAACTCTGCCTCCAGTGTTGCCGAGAAGTTCGTAATGGGACTATTTCGCACCGAGCTGAAATGAGGTTTCAGTATGTGAATAAGGGCTATGATTATATGCATGGTGGTGATCCTTCGCCAGAGTCTTGTGATTCCAAGACTTCAGATGATCCTTGTGTTGAGCTATCTATTGAGTGGACTGCAGAAAGCAATGGAAGTGTTTTTTGTGCCCCAAAGGAGTTTGGGGGATGTGGAAACGGCAAGTTGGAGCTCAAGCATATTCTTCCCAGGGGTTGGATATATGACCTGGAAGCTAAAGCTGGTGATTTGTTAAGAAACTACGTTACTGAACAAACTCCTCTGAAGCACATAGGAGTAGCAGTATCATGCTACAACCGCTCTGTGAGAAGAGCTGCTTCTAGAGAAGGCAGTGATGACAATGACATATACTGCCCTTCTTCAATGGAGATTATAAACGATGGGTTATCAATCTTCCAAAAGCATTGGATTAATGGTGAACCTGTTATCGTTCGTGATGTTCTTCAACAAGCAACAGGTTTGAGCTGGGAGCCCATGGTTATTTGGAGGGCAGTATGTGCAGCTTCAGGTTCAAAAATCAACCCAAAAGTGTCAGAAGTTAAGACGATTGATTGTCTTGCTGGCTGTGAGGTAGAAATCAGCACTCATAAGTTCTTTAAAGGTTATATGGAAGGAAGAACATATAGAAACCTCTGGCCAGAGATGCTTAAGCTAAAAGACTGGCCTCCCTCTGATAAGTTTGAAGATCTTTTGCCTCGCCACTGTGATGAATTTATCCGTTCCTTGCCATTCCAAGAGTACACTGATCCTCGGGTCGGAATGCTCAATCTTGCTGTCAAGTTGCCAATGCATGTCCTGAAACCTGACATGGGTCCAAAAACATATATTGCTTATGGAATAAAAGAAGAGCTTGGCAGAGGAGATTCTGTAACAAAGCTTCATTGTGACATGTCAGATGCGTGTTCACAGGTGAATATTTTGACCCATACAGCAGAAGTAAAGTTAAACGATGAGCAATGCTTGTCTATTTTGAAGTTGAAGAAGGCACACAAGGTCCAAGATGAGAAAGAGAAGTGCTGTGGTGAAATCAATGGAAATATCTCTCCAAATGATGTGGCTGAAGGGGTCGCATTTGTCACTACAGAAAATGAGACAAGAGAACCAGGTGCTGCTCTTTGGGACATTTTCAGAAGAGAAGATACTAAGAAGTTAGAAACATATTTGAGAAAACACTCAAGAGAGTTCAGACATACTTATTGTTCTCCAGTTAAACAGGTTTTCCATCCCATTCATGACCAATGTTTTTATTTAACAATGGAGCACAAGAAGAAGCTGAAGGAGGAGTTCGGTGTTGAACCTTGGACGTTTGAGCAGAAACTAGGGGAGGCTGTGTTTATTCCTGCTGGATGCCCTCACCAAGTTAGAAATCTCATGTCATGCACCAAAGTTGCTGTGGACTTTGTGTCCCCAGAAAACCTCCGTGAGTGTCTGGCTTTAACTAATCAGTTCCGGCTGCTTCCCAAGAACCACAGGGCCAGAGAAGATAAACTTGAGATAAAGAAGATGATAGTGTATGCTGCTGACCAAATTCTCAAAGATTTGGAATCCTTACTCAAGCGTTCTTGA 2079 0.4214 MRRDRLSYVPCTKCEQKLYCDKCIKQWYPDMTVAEIAERCPFCRKNCNCNVCLRSSGMIKTSIRDISDNEKFQYLQYCINLVRPFLKQMCEEQALEEEIEARIQGTSRSEIRILQTLCSDDERVYCNHCATSIVDLHRSCPVCSYELCLQCCREVRNGTISHRAEMRFQYVNKGYDYMHGGDPSPESCDSKTSDDPCVELSIEWTAESNGSVFCAPKEFGGCGNGKLELKHILPRGWIYDLEAKAGDLLRNYVTEQTPLKHIGVAVSCYNRSVRRAASREGSDDNDIYCPSSMEIINDGLSIFQKHWINGEPVIVRDVLQQATGLSWEPMVIWRAVCAASGSKINPKVSEVKTIDCLAGCEVEISTHKFFKGYMEGRTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRSLPFQEYTDPRVGMLNLAVKLPMHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDACSQVNILTHTAEVKLNDEQCLSILKLKKAHKVQDEKEKCCGEINGNISPNDVAEGVAFVTTENETREPGAALWDIFRREDTKKLETYLRKHSREFRHTYCSPVKQVFHPIHDQCFYLTMEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLMSCTKVAVDFVSPENLRECLALTNQFRLLPKNHRAREDKLEIKKMIVYAADQILKDLESLLKRS 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1463 692 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 2 690 IPR045109 GO:0032454|GO:0033169
Prci11g1463 692 Gene3D Cupin 288 664 - -
Prci11g1463 692 SUPERFAMILY Clavaminate synthase-like 301 677 - -
Prci11g1463 692 Pfam JmjC domain, hydroxylase 540 638 IPR003347 -
Prci11g1463 692 SMART cupin_9 402 655 IPR003347 -
Prci11g1463 692 CDD cupin_RmlC-like 578 627 - -
Prci11g1463 692 ProSiteProfiles JmjC domain profile. 421 655 IPR003347 -
Prci11g1463 692 FunFam Transcription factor jumonji domain-containing protein 284 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1463 Prci-Chr11 12373366 12381089 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Prci11g1463 JmjC 4.7e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1463 K15601 K21989 gmx:100797860 1008.44