Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1462 ATGGAGGTGTTTTGCTCTAACGCATTTGAAGTTTCAAGGAGGAGAAAGGTTCAAGAGAGTCATAAGTATCCTCCGATATCGGAAGAGGAAGGAGACATTCTATGTTGTTCAAAGAGGAGGTTTAATATTCAATGCAAGAGAGGTGATCAACCAAAGAAATCTATAGCTGCCTCAAAAAGGAAAAGAAATTTGCAAAATGATTTTTTGATTGATGATTTGGAAGATGACAAGGAAACCGTGGTTGCCAAGATACGGTCCAGGGGAAGAGCTCATAAAATGGACTCTGTGACTATGATGGATACAATAGGCTCAGAATCAAGTGGAGAGAGTCCATCTTCAAGCATTACCACATTGCATTCTCCACCAGCATCCACATTGCCTCCTTCGGATTTAGGTAACCATACTGAGGACAATCACATTGCAACAAGTAGGAGGGATACTAAACGAAATTGCTGGATATGTCATCAGTGCATGAGAAGGGATAGATTAAGCTATGTCCCTTGCACCAAATGCGAACAAAAATTATACTGTGACAAGTGCATCAAGCAATGGTATCCTGATATGACGGTAGCAGAAATTGCAGAGCGTTGCCCATTTTGCCGTAAAAATTGCAATTGCAATGTCTGCTTGCGCTCAAGTGGGATGATCAAGACATCTATCAGGGATATCTCTGATAATGAGAAGTTTCAATATCTGCAATATTGTATCAACTTGGTTCGTCCATTTCTGAAACAAATGTGTGAAGAACAAGCTCTAGAGGAAGAGATTGAAGCTAGAATACAAGGAACATCACGTTCTGAGATTAGGATACTGCAAACTCTATGCAGTGATGATGAACGTGTCTATTGCAACCATTGTGCTACTTCAATTGTTGATCTTCATCGAAGCTGCCCTGTGTGTTCCTATGAACTCTGCCTCCAGTGTTGCCGAGAAGTTCGTAATGGGACTATTTCGCACCGAGCTGAAATGAGGTTTCAGTATGTGAATAAGGGCTATGATTATATGCATGGTGGTGATCCTTCGCCAGAGTCTTGTGATTCCAAGACTTCAGATGATCCTTGTGTTGAGCTATCTATTGAGTGGACTGCAGAAAGCAATGGAAGTGTTTTTTGTGCCCCAAAGGAGTTTGGGGGATGTGGAAACGGCAAGTTGGAGCTCAAGCATATTCTTCCCAGGGGTTGGATATATGACCTGGAAGCTAAAGCTGGTGATTTGTTAAGAAACTACGTTACTGAACAAACTCCTCTGAAGCACATAGGAGTAGCAGTATCATGCTACAACCGCTCTGTGAGAAGAGCTGCTTCTAGAGAAGGCAGTGATGACAATGACATATACTGCCCTTCTTCAATGGAGATTATAAACGATGGGTTATCAATCTTCCAAAAGCATTGGATTAATGGTGAACCTGTTATCGTTCGTGATGTTCTTCAACAAGCAACAGGTTTGAGCTGGGAGCCCATGGTTATTTGGAGGGCAGTATGTGCAGCTTCAGGTTCAAAAATCAACCCAAAAGTGTCAGAAGTTAAGACGATTGATTGTCTTGCTGGCTGTGAGGTAGAAATCAGCACTCATAAGTTCTTTAAAGGTTATATGGAAGGAAGAACATATAGAAACCTCTGGCCAGAGATGCTTAAGCTAAAAGACTGGCCTCCCTCTGATAAGTTTGAAGATCTTTTGCCTCGCCACTGTGATGAATTTATCCGTTCCTTGCCATTCCAAGAGTACACTGATCCTCGGGTCGGAATGCTCAATCTTGCTGTCAAGTTGCCAATGCATGTCCTGAAACCTGACATGGGTCCAAAAACATATATTGCTTATGGAATAAAAGAAGAGCTTGGCAGAGGAGATTCTGTAACAAAGCTTCATTGTGACATGTCAGATGCGGTGAATATTTTGACCCATACAGCAGAAGTAAAGTTAAACGATGAGCAATGCTTGTCTATTTTGAAGTTGAAGAAGGCACACAAGGTCCAAGATGAGAAAGAGAAGTGCTGTGGTGAAATCAATGGAAATATCTCTCCAAATGATGTGGCTGAAGGGGTCGCATTTGTCACTACAGAAAATGAGACAAGAGAACCAGGTGCTGCTCTTTGGGACATTTTCAGAAGAGAAGATACTAAGAAGTTAGAAACATATTTGAGAAAACACTCAAGAGAGTTCAGACATACTTATTGTTCTCCAGTTAAACAGGTTTTCCATCCCATTCATGACCAATGTTTTTATTTAACAATGGAGCACAAGAAGAAGCTGAAGGAGGAGTTCGGTGTTGAACCTTGGACGTTTGAGCAGAAACTAGGGGAGGCTGTGTTTATTCCTGCTGGATGCCCTCACCAAGTTAGAAATCTCATGTCATGCACCAAAGTTGCTGTGGACTTTGTGTCCCCAGAAAACCTCCGTGAGTGTCTGGCTTTAACTAATCAGTTCCGGCTGCTTCCCAAGAACCACAGGGCCAGAGAAGATAAACTTGAGATAAAGAAGATGATAGTGTATGCTGCTGACCAAATTCTCAAAGATTTGGAATCCTTACTCAAGCGTTCTTGA 2541 0.4191 MEVFCSNAFEVSRRRKVQESHKYPPISEEEGDILCCSKRRFNIQCKRGDQPKKSIAASKRKRNLQNDFLIDDLEDDKETVVAKIRSRGRAHKMDSVTMMDTIGSESSGESPSSSITTLHSPPASTLPPSDLGNHTEDNHIATSRRDTKRNCWICHQCMRRDRLSYVPCTKCEQKLYCDKCIKQWYPDMTVAEIAERCPFCRKNCNCNVCLRSSGMIKTSIRDISDNEKFQYLQYCINLVRPFLKQMCEEQALEEEIEARIQGTSRSEIRILQTLCSDDERVYCNHCATSIVDLHRSCPVCSYELCLQCCREVRNGTISHRAEMRFQYVNKGYDYMHGGDPSPESCDSKTSDDPCVELSIEWTAESNGSVFCAPKEFGGCGNGKLELKHILPRGWIYDLEAKAGDLLRNYVTEQTPLKHIGVAVSCYNRSVRRAASREGSDDNDIYCPSSMEIINDGLSIFQKHWINGEPVIVRDVLQQATGLSWEPMVIWRAVCAASGSKINPKVSEVKTIDCLAGCEVEISTHKFFKGYMEGRTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRSLPFQEYTDPRVGMLNLAVKLPMHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILTHTAEVKLNDEQCLSILKLKKAHKVQDEKEKCCGEINGNISPNDVAEGVAFVTTENETREPGAALWDIFRREDTKKLETYLRKHSREFRHTYCSPVKQVFHPIHDQCFYLTMEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLMSCTKVAVDFVSPENLRECLALTNQFRLLPKNHRAREDKLEIKKMIVYAADQILKDLESLLKRS 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1462 846 CDD cupin_RmlC-like 732 781 - -
Prci11g1462 846 Gene3D Cupin 445 818 - -
Prci11g1462 846 ProSiteProfiles Zinc finger RING-type profile. 151 201 IPR001841 -
Prci11g1462 846 FunFam Transcription factor jumonji domain-containing protein 441 818 - -
Prci11g1462 846 ProSiteProfiles JmjC domain profile. 578 809 IPR003347 -
Prci11g1462 846 MobiDBLite consensus disorder prediction 101 136 - -
Prci11g1462 846 MobiDBLite consensus disorder prediction 101 141 - -
Prci11g1462 846 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 148 220 IPR018866 -
Prci11g1462 846 Pfam JmjC domain, hydroxylase 694 792 IPR003347 -
Prci11g1462 846 SMART cupin_9 559 809 IPR003347 -
Prci11g1462 846 SUPERFAMILY Clavaminate synthase-like 458 831 - -
Prci11g1462 846 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 66 844 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1462 Prci-Chr11 12373366 12381851 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Prci11g1462 JmjC 6e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1462 K15601 - gmx:100797860 1035.02