Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1441 ATGGAGTGGACTAGGGGGCACACCATCGCGGGGTCCACCGCCACCGTGTCGGTTGCTGAGGTTCGTGGGTCTGGTCGGATTTTCGCTGTCAAGTCAGTGGAGCTCCATCGCTCCGAATTCATCAGGAGAGAACAGAGTATTCTCTCCGCATTAGACTGTCCTCATATTGTAGCCTACGAAGGTTGCGGCATCACATTTGAAAATGGTGAGTTGATGTATAACTTGTTCATGGAGTATGCGCCTTATGGGTCAATCGCCGACGAAATTCGCGAGCGTAATGGTGGGTTTGATGAGCTTCTGGCTGGACGCTATGCTCGTCAGATTCTGCTTGGGTTGAACTATTTGCATTCCAATGGGATCGTGCATTGTGATTTAAAAGGTCAAAATGTTCTGCTCACCGATGAAGGGGCTAAAATTGCAGACCTGGGCTGTGCCAGGAGAGTTGCGGCGGCGCAGGATTATTATGGTGGAGTAATTGCCGGCACCCCGGCGTTCATGGCGCCGGAGGTGGCGCGCGGGGAGAAGCAGGGGTTCCCTGCCGATGTGTGGGCTCTTGGATGTACTGTGCTGGAGATGTTCACCGGAAAAGCACCGTGGCATGACATTTCCGACCTGAGTGTTCTCTATCGAGTCGGGTTCTCCGGCGGGGTGCCGGAGATTTCAGATTTATTGTCGGAGCAAGGGAAGGATTTTGTCACCAGGTGTTTGAAAACAGATCCGAACGAGAGGTGGACTGCAGGCGAGCTTCTCAAGCATGAGTTCGTTCAGGATTCAAGCAGTGTCTCGGAGAAATTTGATGATTCTAGTTCAAATTCTCCAACTAGTGTGTTGTTGGATCGATGCTTTTGGGACTCGTTGGAAGAGTTGCACACAACCCGAACCCGAACCCGAACCCGACCTCGACCTATGAGCACGACTGTCTGGGGATCCTCCTAG 936 0.5246 MEWTRGHTIGXGSTATVSVAEVRGSGRIFAVKSVELHRSEFIRREQSILSALDCPHIVAYEGCGITFENGELMYNLFMEYAPYGSIADEIRERNGGFDELLAGRYARQILLGLNYLHSNGIVHCDLKGQNVLLTDEGAKIADLGCARRVAAAQDYYGGVIAGTPAFMAPEVARGEKQGFPADVWALGCTVLEMFTGKAPWHDISDPXSVLYRVGFSGGVPEISDLLSEQGKDFVTRCLKTDPNERWTAGELLKHEFVQDSSSVSEKFDDSSSNSPTSVLLDRCFWDSLEELHTTRTRTRTRPRPMSTTVWGSS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1441 313 CDD STKc_MAPKKK 2 257 - -
Prci11g1441 313 SMART serkin_6 3 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1441 313 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 294 - -
Prci11g1441 313 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Prci11g1441 313 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1441 313 SUPERFAMILY Protein kinase-like (PK-like) 3 291 IPR011009 -
Prci11g1441 313 ProSiteProfiles Protein kinase domain profile. 3 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1441 313 Gene3D Transferase(Phosphotransferase) domain 1 2 303 - -
Prci11g1441 313 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1441 Prci-Chr11 12224204 12225406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1441 1 290 MAP Kinase Kinase Kinase AT1G05100 54.000 3.58e-101 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Prci11g1441 Pkinase 4.8e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1441 K20716 - qsa:O6P43_031265 374.015