Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1412 ATGGGCTGTCACAGCAGCAAGGAGAAAAAATCGAAGGCAGAATTTAGTGGCTATGGATCAGCCACGAGTAGTATTGGTAGTGGTAGTACCCATCAAAATTACAACGCTGTTCAGCATTTTTCAACGCAAACCCAGTCTCAGATTCGAACATCAGAATCCAAGCCCCAGCCGCCGCCGCCGCCGCCATCACAGCCGCCAGTGACAGTCCCGGCGAAACCCACTTCCCTGAATGTCAAACCTCCGCAGCAGAAGCCAGAAACCACGATTCTGGGAAAGCCTCTTGAAGATGTTAAGAAATTCTACACTCTGGGCAAAGAACTTGGTAGAGGGCAATTTGGGATTACCTATTTGTGTACTGAGAATTCCACCGGCCACACTTATGCATGCAAATCTATATTGAAGCGGAAGCTTGTGTCTAAAGCGGATAAGGAGGATATGAAGAGGGAAATCCAGATTATGCAGCATTTATCTGGGCAACCCAACATTGTCGAGTTTAAGGGTGCTTATGAAGATAGATATTCTGTGCACCTCATAATGGAGCTTTGTGCTGGTGGGGAGCTATTTGATCGAATCATAGCTCAAGGTCAATATTCAGAGAGAGCTGCTGCATCAATTTGCAGAGCAACTGTTAATGTTGTGCACATTTGCCACTTCATGGGGGTGATGCATCGCGATCTGAAGCCTGAAAATTTCCTGCTATCTAGCAAAGATGAGGGAGCGACGCTTAAGGCTACTGATTTTGGACTATCTGTATTTATTGAAGAAGGGAAGGTATACCGTGATATGGTAGGCAGTGCATATTATGTTGCTCCTGAGGTATTGCGTCGTAGTTATGGGAAAGAAATAGACATTTGGAGTGCAGGCATCATATTGTATATTCTCCTTAGTGGCGTGCCTCCTTTTTGGGCTGAAAATGAAAAGGGAATATTTGATGCTATATTGGAAGGCAAAATTGACTTTGAAAGTCAACCATGGCCCTCAATATCAGATAGTGCTAAAGATTTAGTCAGGAAGATGTTGACACAGGACCCAAAGAAGAGAATTACTTCTGCACAAGTTCTTGAACACCCGTGGATCAGAGAAGGTGGGGAGGCATCAGATAAGCCAATTGACAGCGCAGTTCTGTTGAGAATGAAGCAATTCAGGGCAATGAATAAGCTCAAAAAGCTTGCTTTGAAGGTTATTGCTGAAAATCTTTCTGAAGAGGAGATTAAAGGTCTCAAAGCAATGTTCACCAATATGGACACTGACAATAGTGGCTCTATCACCTATGAAGAACTGAAGACAGGTTTGGCCAGGATTGGATCACAACTGTCCGAGGCTGAAGTGAAGCAACTTATGGATGCTGCTGATGTTGATGGGAATGGAACGATTGACTATATTGAATTCATCTCAGCTACAATGCATAGGCACAGACTTGAGCGAGATGAGCACTTATACAAAGCATTTCAGTATTTTGATAAGGATAACAGTGGGTATATTACTAGAGATGAATTGGAGACTGCTATGACACAGCATGGAATGGGTGACGAAGCGACGATTAAGGAAATAATATCCGAGGTGGATGCAGATAACGATGGGAGAATAAACTATGAGGAATTCTGCACAATGATGAGGAGTGGAATGCAGCACCAAGGACCACTTTTCTAA 1650 0.437 MGCHSSKEKKSKAEFSGYGSATSSIGSGSTHQNYNAVQHFSTQTQSQIRTSESKPQPPPPPPSQPPVTVPAKPTSLNVKPPQQKPETTILGKPLEDVKKFYTLGKELGRGQFGITYLCTENSTGHTYACKSILKRKLVSKADKEDMKREIQIMQHLSGQPNIVEFKGAYEDRYSVHLIMELCAGGELFDRIIAQGQYSERAAASICRATVNVVHICHFMGVMHRDLKPENFLLSSKDEGATLKATDFGLSVFIEEGKVYRDMVGSAYYVAPEVLRRSYGKEIDIWSAGIILYILLSGVPPFWAENEKGIFDAILEGKIDFESQPWPSISDSAKDLVRKMLTQDPKKRITSAQVLEHPWIREGGEASDKPIDSAVLLRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKAMFTNMDTDNSGSITYEELKTGLARIGSQLSEAEVKQLMDAADVDGNGTIDYIEFISATMHRHRLERDEHLYKAFQYFDKDNSGYITRDELETAMTQHGMGDEATIKEIISEVDADNDGRINYEEFCTMMRSGMQHQGPLF 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1412 549 FunFam Calcium-dependent protein kinase 1 103 186 - -
Prci11g1412 549 MobiDBLite consensus disorder prediction 53 69 - -
Prci11g1412 549 FunFam calcium-dependent protein kinase 1 187 366 - -
Prci11g1412 549 CDD STKc_CAMK 100 358 - -
Prci11g1412 549 SMART serkin_6 101 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1412 549 MobiDBLite consensus disorder prediction 1 88 - -
Prci11g1412 549 PANTHER SERINE/THREONINE-PROTEIN KINASE 94 534 - -
Prci11g1412 549 FunFam Calcium-dependent protein kinase 1 367 542 - -
Prci11g1412 549 ProSiteProfiles EF-hand calcium-binding domain profile. 510 544 IPR002048 GO:0005509
Prci11g1412 549 ProSitePatterns EF-hand calcium-binding domain. 415 427 IPR018247 -
Prci11g1412 549 ProSiteProfiles EF-hand calcium-binding domain profile. 438 473 IPR002048 GO:0005509
Prci11g1412 549 Pfam EF-hand domain pair 477 539 IPR002048 GO:0005509
Prci11g1412 549 Pfam EF-hand domain pair 407 467 IPR002048 GO:0005509
Prci11g1412 549 ProSitePatterns Protein kinases ATP-binding region signature. 107 134 IPR017441 GO:0005524
Prci11g1412 549 MobiDBLite consensus disorder prediction 16 52 - -
Prci11g1412 549 ProSiteProfiles EF-hand calcium-binding domain profile. 402 437 IPR002048 GO:0005509
Prci11g1412 549 SUPERFAMILY EF-hand 398 538 IPR011992 -
Prci11g1412 549 ProSitePatterns EF-hand calcium-binding domain. 522 534 IPR018247 -
Prci11g1412 549 Gene3D Transferase(Phosphotransferase) domain 1 187 366 - -
Prci11g1412 549 ProSitePatterns EF-hand calcium-binding domain. 451 463 IPR018247 -
Prci11g1412 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Prci11g1412 549 ProSiteProfiles Protein kinase domain profile. 101 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1412 549 SMART efh_1 478 506 IPR002048 GO:0005509
Prci11g1412 549 SMART efh_1 513 541 IPR002048 GO:0005509
Prci11g1412 549 SMART efh_1 406 434 IPR002048 GO:0005509
Prci11g1412 549 SMART efh_1 442 470 IPR002048 GO:0005509
Prci11g1412 549 SUPERFAMILY Protein kinase-like (PK-like) 78 380 IPR011009 -
Prci11g1412 549 CDD EFh_PI-PLC 407 540 - -
Prci11g1412 549 Gene3D - 367 544 - -
Prci11g1412 549 Pfam Protein kinase domain 101 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1412 549 ProSitePatterns EF-hand calcium-binding domain. 487 499 IPR018247 -
Prci11g1412 549 Gene3D Phosphorylase Kinase; domain 1 103 186 - -
Prci11g1412 549 ProSiteProfiles EF-hand calcium-binding domain profile. 474 509 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1412 Prci-Chr11 12024680 12028992 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1412 1 549 EF-hand Containing Proteins AT4G04720 74.182 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci11g1412 Pkinase 6.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1412 K13412 - gmx:100816859 884.789