Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1397 ATGAACCTCCTTATGCGTCACGTATGTCTCGTCGTCTTCGCTTTTCAAGGACATATCCAATTCAAAACTCCCAAGCGCCCATCTTACAACCTCAACTTCCAATCCCCTTGTCAGAAGTTCTTTACCGCCTCCAAGAAAACTCCATCCTCGGCATTCCGTCGCCGGCCGTCCATCGCACCGCCATCTTCAACTCGAACCAAGAAGTCGGGGGCGGCGGCTAGGAAACTCAAGGAATTTGAACTTGAGCTGTCTCAGTCCTCGAGGAAAGCTCAAATCAAGAAAGAACAGTCTCTCAAATCTCTAACCAAGTCCATCACTGTTTGGCTTAATTTTTTGTTCGAAAACCCGGCTACTTGCGGATGCGACTTGTCCATCGCCGGTATTCAGATGGGGGATAAGCATTCTGAAGCGGAGGCGACGAAGGGCAAGAGGGATAGCGGTCCTGGAATTTCCATTGGGGTTGATAAAGTCTGGCGTACTCCGAAGCGGCAGAGGAAGATGTGGTCGCGGGCAGGGGAGCGTGTTGGTAATGAAAATGCGCTCTTGGAATTGCCAAATTCTATGTTTCCCTACTTGAGGGAATCTCTAGAGGATGTCTGCAGTTTCGATGATTTGAAGCAGCGAATGAGAGTTTATCTGAACTTGGGAAGTTGTAAAGAGATTTTTGAAGTTATGAATCAAGTCACCAAGAATATTGATGAAGGAAGGTTAAAGTTGAAGCCACATTGCCCCATCGTAACAGACCTCGGATTGAAAAATAAAGCCACAAGAATCCTTATGTGTTATAATCCAATTTGGCTCCGGATTGGTTTATTTATAATTTTTGGTGGCGACTCTTTGGTGCCTAACGGGAATGGTGATTCTGAACAAGAAATCACGTTTTTGAAAATGGTTATTGAGAAGCAATTTTTTTCACATGCTGGTTTGGCAAAAGCGTATGCTTATAACAAGATGGTTGACGGCCTATACAGGCCAGGGTACTATGAGAATTTGGGGAATGTGATTTTAAAGAGGATTTTATTGCTTGTGCTTTCTCTGGATAGAATTAAATGTCAGAGCTGCCTTTCACTTAAGTATGGTATTGATGGATTGGATGGGGGTTCCCCTTTGTTGTTCAAAGCAGAAACTTGGATTAAATCAAGTAGTCAAGTCATCAATGAATTCCTATCGTCAGAGATAATGCATGGAGAAGGAAATCTTCTGTCTCATTTAATGATAATAGGCTACAAACTATCTCATCAACAGGGGCCACTTGTTGAGTATAACTTCAAGGTCAGAGATTTATTTGTAGATCTTCAAGATGGATTAAAGCTCTGTAGAGCTATACAGCTCTTGCAGCATGATTCTTCTATCCTCACGAAAATTGCAGTTCCCCCAGACACTTACAAGAAGAATTTGGCCAACTGTGGCCTTGCCCTACAATACCTTAAGCAAGCTGGTGTGTTGCTACACGATGAGGATAACATTATGATTGTAGCAGAGGATGTTGCCAATAGAGACAAAGAACTTGTTCTCTCATTGCTGTGGAATATCTTTGTTCACTTGCAGCTACCTCTTCTGGTTGATAAATCAAGTTTACAAGAGGAAATTGGCAAAATTCGTGGACTTGGTGTGGATGCCATTAACAATTCAAATTCAAGTTCATTGGAATTGCTTTTGAATTGGATTCAGGCAGTTTGTGAAAATTATGATTGTGGGATTGACAATTTTGATTCATTAGTTGATGGAAAAGCTATCTGGTGCTTACTTGATTATTATTTCCAGAAAGAACTTCATAGCTCCTGCTTACTGAAGGAAGTCAATATGAAAAGCGGCAAGGAATCAATAATGTCTGTCAATGATTATTCGGATGCAGTGTACAATTTTATATTATCACAGCGGTTGACAACATTATTAGGAAATTTTCCGGAGGTACTTCAAATAAGCGAGCTACTTGAATATAATGGTGCTTCCAGTGATCGAAGTGTGGTGATATTGTTGGTTTTCCTTGCAAGGCAATTATTTGTCAAGAAAAATGTGGATCAATTAAATTTCCACAAGCTCCTTGGTTGTGATTGCCAAAGTCTGTACCGGAAACATTTGAGGATGGGGCAGTGTCTTTCTAATTCTGGAGTCGTACAAAAGCCGGACACTTTTGATGTGCATGACAACGAAGATGCTACAAAAAAATTCAAGGCCATCCAGGCTTGGTGGCAAGATATGGCAGAAAGAAATCAGAAATCTTGTATTAAATCAGCTGCGTGCAGACCCATTGAAAGCAGTGCCAACATTGGAAGAGAAACCGCTGCAATAACAATACAATCACATTTCAGAAGATTGGTTGGTCGTCGCTTGTTTCTCAAAATGAATAATGCTGTCTCTCTTTTGCAAACTGTTTTCCGAGCTTGGCTAGAAGTGAGGCAGCAGTCTTTGTTCACCGCCGTCCACCGTCAAAAAATTTCATGTGCAATAAGCAAGAGGTCAGAAACATATAGGAGATATGCCATGTTTTTCGTTCAAAGGCACGCTTTTTTGAAGTTGAAGAGGTCAACATTAATTATCCAGCAAGCAGCGAGGAGTTGCCTCTCTCGGAGGCATCAACAGGGATGTAGTGTACTTCCTTATCTGACGGCTTCAGATCCAGTGGCTGCTGCCACTATCGTTCAGAAATTTGTTCGTGGCTGGATGGCACGATCTAGATATAATCATATGCTTGATCAGCAAGAGAAAACTTCATATTTATACGTACAAAAGGTTACTTTTGATCTTCAAACAAAAGCAGCCATCAGGATTCAGCTTGCTTGGAAGAGGTATATGTGCTGCAAGTCTACTCAGAGGCACTTCTATGCGACAATAATTCAAAGCCATTTTCGTATGTGGCGGTTAAGGAGAATATATTTGAACCAGATTCAGGCTGTTTTGAGAATCCAGTCTTATTTTCGAATGTCAATAAGTATAAAAACTTTTCAACACTTCAAAATGGCATTTAAGGCAGCCATTGTCATTCAGTCTTTCACACGTGCGTGGATTGCACGGAAGGAAGCTTATGTACGCAGAAATCGTATCGTTGCAATTCAAAGGCATTGCCGCGCTTGGCTGGTGAGAAGGGACTTCATGTGCCAAAGAGGCGCTGCAATGAAGATCCAAAGCGTCATTCTTAGTCTGAAATACCAAAAGGCTCTCAAGTTCGGAAAGATGCAGTGTTGCAGATTCAGCGTTTTATCAGGGGGCATTTATCACGAAATAGGCTGGGGTGCTTCTCAGCAATGTGCAATGGTTCCTAATGGTTGCATTTTAAGATCAGTTGGTTACTCTAGTTTTCAACTGGAACTATTCTTGTGTTCTATTCTGAAATTGCAGCGATGGTGGAAGGGTCTCTTGTTACATAAGTTAAGAACAAAGTCTGTTATTACAATCCAGTCTTGTACTCGTGGGTGGATTGCTAGGCGAATGGCAACAGTTCGCAGGCACAAAGTTGTCGTCATTCAATCCCACTGGAGAGGTTATCTTGCTCGGAAAGAGTCAAAAGAGCAACTGCTAGACCTGCGCTTGAGAATGCAGAAGTCTGCCAGAAATGTGGATGATAGCAAGCGTCTCATAAATAGGCTTCTCGCAGCACTTTCAGAGCTACTTCACGTGAAGAGTGTCAGTGGCATCCTTCATACTTGTGCAACGTTGGATATGGCTACAGAACATTCTCAGAGATGTTGCGAAGAACTTGCTGCCGCAGGGGCTATAGATAAGTTGCTGACGCTTATTCGCTCAGTGAGCCGAAGTATACCTGATCAGGAGGTTCTCAAGCATGCTCTGTCAAGTCTCCGAAATCTGGCTCGCTACCCTCACTTACTTGATTTGCTGATCCAAAGCAACGGTTCTCTACAGACAATTCTCTGGGAATTACTAAGGAATAAGGAAGACAGTTACTTCATTGCTTCTGAACTTCTGATGAAGATATCTTCCACTCCTAAAGGTGTTGAATCGTTACGCAAGCTACCTGCACTTGTAAAACGACTGCATGCTCTTGTTGAGGAGCTTACACGGAAGGCAATCTACGAGAAAAGGTCAGAACTGGGTTTCAGCGGAGAGGAAAAAGCAAGATTTATTTTGAGTTTTTGTGTTAGTAGACATATGCAAATATCTTAA 4122 0.4214 MNLLMRHVCLVVFAFQGHIQFKTPKRPSYNLNFQSPCQKFFTASKKTPXSSAFRRRPSIAPPSSTRTKKSGAAARKLKEFELELSQSSRKAQIKKEQSLKSLTKSITVWLNFLFENPATCGCDLSIAGIQMGDKHSEAEATKGKRDSGPGISIGVDKVWRTPKRQRKMWSRAGERVGNENALLELPNSMFPYLRESLEDVCSFDDLKQRMRVYLNLGSCKEIFEVMNQVTKNIDEGRLKLKPHCPIVTDLGLKNKATRILMCYNPIWLRIGLFIIFGGDSLVPNGNGDSEQEITFLKMVIEKQFFSHAGLAKAYAYNKMVDGLYRPGYYENLGNVILKRILLLVLSLDRIKCQSCLSLKYGIDGLDGGSPLLFKAETWIKSSSQVINEFLSSEIMHGEGNLLSHLMIIGYKLSHQQGPLVEYNFKVRDLFVDLQDGLKLCRAIQLLQHDSSILTKIAVPPDTYKKNLANCGLALQYLKQAGVLLHDEDNIMIVAEDVANRDKELVLSLLWNIFVHLQLPLLVDKSSLQEEIGKIRGLGVDAINNSNSSSLELLLNWIQAVCENYDCGIDNFDSLVDGKAIWCLLDYYFQKELHSSCLLKEVNMKSGKESIMSVNDYSDAVYNFILSQRLTTLLGNFPEVLQISELLEYNGASSDRSVVILLVFLARQLFVKKNVDQLNFHKLLGCDCQSLYRKHLRMGQCLSNSGVVQKPDTFDVHDNEDATKKFKAIQAWWQDMAERNQKSCIKSAACRPIESSANIGRETAAITIQSHFRRLVGRRLFLKMNNAVSLLQTVFRAWLEVRQQSLFTAVHRQKISCAISKRSETYRRYAMFFVQRHAFLKLKRSTLIIQQAARSCLSRRHQQGCSVLPYLTASDPVAAATIVQKFVRGWMARSRYNHMLDQQEKTSYLYVQKVTFDLQTKAAIRIQLAWKRYMCCKSTQRHFYATIIQSHFRMWRLRRIYLNQIQAVLRIQSYFRMSISIKTFQHFKMAFKAAIVIQSFTRAWIARKEAYVRRNRIVAIQRHCRAWLVRRDFMCQRGAAMKIQSVILSLKYQKALKFGKMQCCRFSVLSGGIYHEIGWGASQQCAMVPNGCILRSVGYSSFQLELFLCSILKLQRWWKGLLLHKLRTKSVITIQSCTRGWIARRMATVRRHKVVVIQSHWRGYLARKESKEQLLDLRLRMQKSARNVDDSKRLINRLLAALSELLHVKSVSGILHTCATLDMATEHSQRCCEELAAAGAIDKLLTLIRSVSRSIPDQEVLKHALSSLRNLARYPHLLDLLIQSNGSLQTILWELLRNKEDSYFIASELLMKISSTPKGVESLRKLPALVKRLHALVEELTRKAIYEKRSELGFSGEEKARFILSFCVSRHMQIS 1374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1397 1374 Coils Coil 77 97 - -
Prci11g1397 1374 ProSiteProfiles IQ motif profile. 1149 1177 IPR000048 GO:0005515
Prci11g1397 1374 Gene3D - 1124 1173 - -
Prci11g1397 1374 Gene3D - 941 990 - -
Prci11g1397 1374 Gene3D - 760 813 - -
Prci11g1397 1374 Gene3D - 876 940 - -
Prci11g1397 1374 Pfam IQ calmodulin-binding motif 1151 1168 IPR000048 GO:0005515
Prci11g1397 1374 Pfam IQ calmodulin-binding motif 1015 1032 IPR000048 GO:0005515
Prci11g1397 1374 Pfam IQ calmodulin-binding motif 991 1008 IPR000048 GO:0005515
Prci11g1397 1374 Pfam IQ calmodulin-binding motif 763 780 IPR000048 GO:0005515
Prci11g1397 1374 Pfam IQ calmodulin-binding motif 944 960 IPR000048 GO:0005515
Prci11g1397 1374 Pfam IQ calmodulin-binding motif 877 895 IPR000048 GO:0005515
Prci11g1397 1374 Pfam IQ calmodulin-binding motif 1127 1144 IPR000048 GO:0005515
Prci11g1397 1374 ProSiteProfiles IQ motif profile. 1126 1153 IPR000048 GO:0005515
Prci11g1397 1374 ProSiteProfiles IQ motif profile. 1012 1041 IPR000048 GO:0005515
Prci11g1397 1374 Gene3D - 412 517 IPR036872 -
Prci11g1397 1374 ProSiteProfiles IQ motif profile. 991 1018 IPR000048 GO:0005515
Prci11g1397 1374 ProSiteProfiles Calponin homology (CH) domain profile. 405 517 IPR001715 GO:0005515
Prci11g1397 1374 Gene3D - 544 670 IPR036872 -
Prci11g1397 1374 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1238 1285 IPR000225 GO:0005515
Prci11g1397 1374 ProSiteProfiles IQ motif profile. 760 788 IPR000048 GO:0005515
Prci11g1397 1374 ProSiteProfiles IQ motif profile. 877 904 IPR000048 GO:0005515
Prci11g1397 1374 PANTHER UNCHARACTERIZED 35 862 - -
Prci11g1397 1374 SUPERFAMILY Calponin-homology domain, CH-domain 322 599 IPR036872 -
Prci11g1397 1374 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1110 1172 IPR027417 -
Prci11g1397 1374 MobiDBLite consensus disorder prediction 51 70 - -
Prci11g1397 1374 SUPERFAMILY ARM repeat 1195 1337 IPR016024 -
Prci11g1397 1374 Gene3D - 1175 1360 IPR011989 -
Prci11g1397 1374 CDD CH_ASPM_rpt1 401 512 - -
Prci11g1397 1374 SMART iq_5 759 781 IPR000048 GO:0005515
Prci11g1397 1374 SMART iq_5 917 939 IPR000048 GO:0005515
Prci11g1397 1374 SMART iq_5 782 804 IPR000048 GO:0005515
Prci11g1397 1374 SMART iq_5 840 862 IPR000048 GO:0005515
Prci11g1397 1374 SMART iq_5 1148 1170 IPR000048 GO:0005515
Prci11g1397 1374 SMART iq_5 988 1010 IPR000048 GO:0005515
Prci11g1397 1374 SMART iq_5 1011 1033 IPR000048 GO:0005515
Prci11g1397 1374 SMART iq_5 874 896 IPR000048 GO:0005515
Prci11g1397 1374 SMART iq_5 1125 1147 IPR000048 GO:0005515
Prci11g1397 1374 SMART iq_5 962 984 IPR000048 GO:0005515
Prci11g1397 1374 SMART iq_5 944 961 IPR000048 GO:0005515
Prci11g1397 1374 SMART iq_5 1034 1056 IPR000048 GO:0005515
Prci11g1397 1374 Pfam Calponin homology (CH) domain 424 516 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1397 Prci-Chr11 11893240 11902182 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1397 832 993 Myosins gene family AT4G33200 24.691 5.96e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1397 K16743 - jre:108981478 1541.17