Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1390 ATGGATTGTTTCCCATGCTGCAATAAGCCTGAGGCTGAAACTGTTCCTCTGAACAAAAGTCCCATGGAATATGCACAATCCAGGAAATCCACATTCAAATCTTTTTTGGGGGCTCTCTCTTCCAAAACAGGTAGCAGCAGACAAAAACATATTACTGCTGAGATACGAAAATATGGAACAGCGAAGAACAATGCTCGAGTCTTCACAATCCAAGAACTCGCCTCCGCAACTGACAACTTCAGTTCTGAATGTTTGATTGGCGAAGGTGGTTTTGGCAGTGTCTACAAAGGATACATACAAAGCATTGACCAAGCTGTGGCTGTGAAGCGACTGGACAGGAATAAAATGCAAGGAAGTAGAGAATTCTTTTCAGAGGTAGTAACGTTGAGTCTAGTGAAGCATCCCAACCTCGTCAGGCTCATAGGTTATTGCATTGAAGGAGATCAAAGGATGTTAGTTTATGAATTGATGGCCAATGGCAGCCTCGAAAGTCACCTTCTAGATTTAGAGCCAGATAAGGAGGGACTGGATTGGGCTACGAGAATGAAAATAGCAGAAGGAGCAGCGAGGGGCATGGAGTATCTGCATGAAGAAGCAGATCCACCGATAATATACAGAGACTTGAAAGCATCAAACATATTGTTAGATGAGAACTTTAATGCCAAGCTGTCAGATTTTGGATTGGCCAAGATGGGACCAACAGAGGAAGGCAAGGATCACGTCTCCACCAGGGTGATGGGGACATATGGGTACTGTTCACCCGAGTATGCTTTGACTGGGCGTGTCACCACAAAGTCAGATGTGTATAGTTTTGGAGTTGTGTTAATGGAGATCATCACCGGAAGAAGAGTCTATGATACTTCTAGAGCAGAAGAAGAGCAAAATCTTATCGATTGGGCACAGCCACTGCTTGAAGACAGAGAGAAGTTCACACTAATGGCAGATCCATTGCTGAAGGATAACTTCCCAGTGAAAGGACTTTTCAAAGCACTCGCAGTGGCAGCCATGTGTCTGCAAGAAGAAGCAGACACAAGACCTTTGATGAGTGATGTAGTAACAGCCCTTCAGCATATAACACTCCCAGTAAATGGTGAAGAAGATGATCCTCAATATAATAAAGAAGAATCTGTAAAAATAGCAGGCCACGTTGAATCATTTAGGGTTGGAAGTTCACATGTAGACTATCAACAACATGAAAGGTTTGGAAATTCACGTGTAGACAATCAACAACATCACAGGGTTGGGAGTTCAAGTGTAGGCCATCAACAACATCACAGGGTTGGGAGTTCAAGTGTTGGCCATCAACATCATCACTGGGCTGGAAGTTCAAGTGCAGGCCATCAACAATTGTAG 1353 0.4375 MDCFPCCNKPEAETVPLNKSPMEYAQSRKSTFKSFLGALSSKTGSSRQKHITAEIRKYGTAKNNARVFTIQELASATDNFSSECLIGEGGFGSVYKGYIQSIDQAVAVKRLDRNKMQGSREFFSEVVTLSLVKHPNLVRLIGYCIEGDQRMLVYELMANGSLESHLLDLEPDKEGLDWATRMKIAEGAARGMEYLHEEADPPIIYRDLKASNILLDENFNAKLSDFGLAKMGPTEEGKDHVSTRVMGTYGYCSPEYALTGRVTTKSDVYSFGVVLMEIITGRRVYDTSRAEEEQNLIDWAQPLLEDREKFTLMADPLLKDNFPVKGLFKALAVAAMCLQEEADTRPLMSDVVTALQHITLPVNGEEDDPQYNKEESVKIAGHVESFRVGSSHVDYQQHERFGNSRVDNQQHHRVGSSSVGHQQHHRVGSSSVGHQHHHWAGSSSAGHQQL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1390 450 ProSiteProfiles Protein kinase domain profile. 80 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1390 450 PANTHER OS07G0668900 PROTEIN 3 361 - -
Prci11g1390 450 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Prci11g1390 450 Gene3D Phosphorylase Kinase; domain 1 40 156 - -
Prci11g1390 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Prci11g1390 450 CDD STKc_IRAK 86 358 - -
Prci11g1390 450 MobiDBLite consensus disorder prediction 408 450 - -
Prci11g1390 450 FunFam Serine/threonine-protein kinase PBS1 157 374 - -
Prci11g1390 450 FunFam serine/threonine-protein kinase PBS1-like 46 156 - -
Prci11g1390 450 Pfam Protein tyrosine and serine/threonine kinase 85 297 IPR001245 GO:0004672|GO:0006468
Prci11g1390 450 SMART serkin_6 80 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1390 450 SUPERFAMILY Protein kinase-like (PK-like) 62 356 IPR011009 -
Prci11g1390 450 Gene3D Transferase(Phosphotransferase) domain 1 157 380 - -
Prci11g1390 450 MobiDBLite consensus disorder prediction 401 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1390 Prci-Chr11 11852696 11855429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1390 1 378 Glycoside Hydrolase AT3G07070 55.784 5.22e-144 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Prci11g1390 PK_Tyr_Ser-Thr 3.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1390 - - pcin:129285479 882.863