Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1385 ATGGATTCTTCAAAACTCTCTCTCCTTGCTTGCCTTGTAATCCTTTTGATTGTTAGAATCAAAGCGTCTTGTTCAGACACAACTTATGCACCAAACAGCACATTCCAAACAAACGTTAATCGCTTACTTTCTTCCCTTTCCTCCAACGCCAATCAAATTGATGGATTTTACAACACCACCGTGGGAGAAAACAGCGACGCCGTCCACGGCCTCTTCCAGTGCCATGGCTCTGCCACCGTCCCAGCCTGTCAAACATGTGTTTCCGACGGAATCAAAAAAATCCTTCAGAGGTGCCCCAATAATACAGGAGCCGTCGCTTGGTTCGAAAACTGCTGGTTACATTACTCCGACGAGTATTTCTTCTCCACGATGCAAGAACAACCCCAGCAAATTGTTGTTAACGCCCGCAACGCAACAGACACGACGAGCTTTATGAACCTGTTGGGTGAAACCTTGACAGTGGTTGCGAAAGAGGCGTCGGAAGGGGGAAGCAAGAAATTTGCAACCAAAGAAGTAAAGTATAGTCCTTTTCAAACTCTATATACTCTGGCGCAGTGCACGAAGGATATATCTGAGATTGAATGTCGGAACTGTCTGGGAAACAGTATTAGCAATTTGCCTACTTGCTGTAATGGAAATGTTGGGGGAGTAACCCAGAAGCCCAGTTGCGTTTTAAGGTATGAAGTCTACGCCTTCTACCAGGACTTTCCTCCGCCACCAGCCCCTCCGCTGCAATCCACTTCCCAAGATAAAGGCAGGATTTCAACTGGTACAGTCACTTCCATAGCTGTTCCAACATTTAAATTCATATTGACAGTCTCGCTCGGCAGCTTCTGGTGCTTAAAAAGGAGAGCAAGGATAAAGAAGCATACATCACTTCCTGTACAAACTGTTGAGATTTCAAGTGTAGAGTCCCTACAATTTGATTTGGATACCATCAAATCAGCCACAAACGACTTCTCTCCTGATAATAAACTAGGGCAAGGAGGATTTGGCGAGGTGTACAAGGGTACTCTTCCTGGTGGAAAAGAGTTAGCTGTGAAGAGATTATCAAGCAATTCCAAACAAGGTGTAGGAGAATTTAAGAATGAAGTTGTTACGATGGCAAAACTTCAACACAGAAATCTTGTGAGGTTACTAGGATTTTGTTTAGATGAGGAAGAAAAGATACTTGTCTATGAATTCTTGCCCAACAAAAGCTTGGATAAGTTTCTGTTTGGACCTGAAAATGAAGGTAAATTGAATTGGTCAAAACGGTACAAGATTATCGAAGGAATTGTAAAGGGGATGCTTTATCTTCATGAAGACTCTCGACTCAAAATTATACATCGAGATCTCAAAGCTAGTAATGTACTTTTGGATGAAGATTTGAATCCAAAAATTTCTGATTTTGGCATGGCTAGAATTTTTGAAGTTGATGAAACTCAAGCAAGCACGAGTAGAGTTGTCGGTACCTTTGGCTACATGGCTCCAGAATATATAATGCATGGTCATATTTCAATCAAATCTGACATATATAGCCTTGGTGTCCTAATTCTGGAGATTATTAGTGGTGAGAAGAATACAGCTTTCTACGTATCAAGTTACGCTGAAGACCTACTAAGCTATGCTTCGAAGCTGTGGAGGGAAGGGACGCCATTAGAATTGTTGGATCCTAGTTTAAGAGATTCTTGTTCAAGAAATGAAGTTAATAAATGCATTCATATAAGCATGTTATGTATCCAGGAAAATCCAGCACTGAGACCTACAATGCAATCTATTATGGTAATGCTAAGTAGCCACTCTGTCACCCTATCAGACCCTCAAGAGCCAGCATTTTTTGTTGATCGCCATAGAACAAACTCAAACAATCCGACCATTTCTGAGAATAGTTCGGATCAATCTACAAGCAAGTCGGTGCAACGGTCTGTGGATGAAGATCCAATTACTGATTTGTATCCTCGCTAG 1947 0.4186 MDSSKLSLLACLVILLIVRIKASCSDTTYAPNSTFQTNVNRLLSSLSSNANQIDGFYNTTVGENSDAVHGLFQCHGSATVPACQTCVSDGIKKILQRCPNNTGAVAWFENCWLHYSDEYFFSTMQEQPQQIVVNARNATDTTSFMNLLGETLTVVAKEASEGGSKKFATKEVKYSPFQTLYTLAQCTKDISEIECRNCLGNSISNLPTCCNGNVGGVTQKPSCVLRYEVYAFYQDFPPPPAPPLQSTSQDKGRISTGTVTSIAVPTFKFILTVSLGSFWCLKRRARIKKHTSLPVQTVEISSVESLQFDLDTIKSATNDFSPDNKLGQGGFGEVYKGTLPGGKELAVKRLSSNSKQGVGEFKNEVVTMAKLQHRNLVRLLGFCLDEEEKILVYEFLPNKSLDKFLFGPENEGKLNWSKRYKIIEGIVKGMLYLHEDSRLKIIHRDLKASNVLLDEDLNPKISDFGMARIFEVDETQASTSRVVGTFGYMAPEYIMHGHISIKSDIYSLGVLILEIISGEKNTAFYVSSYAEDLLSYASKLWREGTPLELLDPSLRDSCSRNEVNKCIHISMLCIQENPALRPTMQSIMVMLSSHSVTLSDPQEPAFFVDRHRTNSNNPTISENSSDQSTSKSVQRSVDEDPITDLYPR 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1385 648 MobiDBLite consensus disorder prediction 609 636 - -
Prci11g1385 648 ProSiteProfiles Protein kinase domain profile. 320 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1385 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Prci11g1385 648 Pfam Salt stress response/antifungal 137 229 IPR002902 -
Prci11g1385 648 Pfam Salt stress response/antifungal 24 117 IPR002902 -
Prci11g1385 648 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 17 120 - -
Prci11g1385 648 ProSiteProfiles Gnk2-homologous domain profile. 126 232 IPR002902 -
Prci11g1385 648 ProSiteProfiles Gnk2-homologous domain profile. 17 120 IPR002902 -
Prci11g1385 648 FunFam cysteine-rich receptor-like protein kinase 10 396 598 - -
Prci11g1385 648 SUPERFAMILY Protein kinase-like (PK-like) 305 618 IPR011009 -
Prci11g1385 648 CDD STKc_IRAK 326 591 - -
Prci11g1385 648 Gene3D Transferase(Phosphotransferase) domain 1 396 605 - -
Prci11g1385 648 FunFam Cysteine-rich receptor-like protein kinase 10 282 395 - -
Prci11g1385 648 FunFam Cysteine-rich receptor-like protein kinase 25 128 232 - -
Prci11g1385 648 Gene3D - 18 120 IPR038408 -
Prci11g1385 648 Gene3D - 127 232 IPR038408 -
Prci11g1385 648 SMART serkin_6 320 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1385 648 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 24 635 - -
Prci11g1385 648 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Prci11g1385 648 MobiDBLite consensus disorder prediction 609 648 - -
Prci11g1385 648 Pfam Protein tyrosine and serine/threonine kinase 323 590 IPR001245 GO:0004672|GO:0006468
Prci11g1385 648 Gene3D Phosphorylase Kinase; domain 1 281 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1385 Prci-Chr11 11776518 11779838 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1385 27 648 Receptor kinase-like Gene Family AT4G05200 48.762 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g1385 PK_Tyr_Ser-Thr 8.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1385 - - csin:114306417 695.656