Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1384 ATGGTGAGGTATACAGGGTATTTTACCTGGCGGACAAAGTTAGCTGTGAAGAGACTGTCAAGTAGTTCCAGACAAGGTGTACCAGAATTTAAGAATGAAGTAGTAGCTACAATGGCAAAACTTCGACACAGAAATCTTGTAAGGTTACAAGGGATTTGCTTGGATGAAGAAGAAAAGATACTCGTATATGAATTTTTGCGCAACAAAAGCTTGGACAATTTTCTGTTTCGAACCGAAAACAAAGATAAATTGAATTGGTCACAGCTGCAAATTATTGAAGGCATTGCAAGGGGAATACTTTATTTTCATGAAGATTCTCAGCTCAAAATTATACATCGTGATCTTAAAGCTAGCAATGTGTTGTTGGATGAAGATTTGAATCCAAAAATATCTGACTTTGGTATAGCTAGAATTTTTGGAGTTGATCAAACTCAAGCTAGCACAAGTAGAGTTGTCGGGACCTATGGCTACATGGCTCCAGAATATGCAATGCATGGTCATATTTCAGTAAAATCTGATATATATAGTTTTGGTGTCCTAATTCTAGAGATCATTAGTGGCAACAAGAATGCATCTTTCTATATATCAAGCCATGCTGAAGACTTGCTAAGCTATGCCTGGAAACTCTGGAGGGAAGGGGCGCCATTAGAATTGCTGGATCTTAGTCTAACAAGTTCTTGTTCAAGGAATGAAGTCATGAGATGCATTCATATAAGCTTGTTGTGTATTCAGGAAAATCCAGCTCTAAGACCTGCAATCCAATCTATTTTGGTGATGCTAAGTAGTCATTCCGTCACCTTGTCAGATCCTCAAGAGCCAGCTGCATCTTTTGTAGATCGCCATAGAACAGATTTAAACAATCTTGCAATTTTTGAGAATACTTCGGATCGTTCTGCAAGTAAATATATGCAACGGTCTGTGAATGAAGATGCAATTACTGACTTGCATCCTCGTTAG 957 0.3814 MVRYTGYFTWRTKLAVKRLSSSSRQGVPEFKNEVVATMAKLRHRNLVRLQGICLDEEEKILVYEFLRNKSLDNFLFRTENKDKLNWSQRXQIIEGIARGILYFHEDSQLKIIHRDLKASNVLLDEDLNPKISDFGIARIFGVDQTQASTSRVVGTYGYMAPEYAMHGHISVKSDIYSFGVLILEIISGNKNASFYISSHAEDLLSYAWKLWREGAPLELLDLSLTSSCSRNEVMRCIHISLLCIQENPALRPAIQSILVMLSSHSVTLSDPQEPAASFVDRHRTDLNNLAIFENTSDRSASKYMQRSVNEDAITDLHPR 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1384 319 Pfam Protein tyrosine and serine/threonine kinase 11 258 IPR001245 GO:0004672|GO:0006468
Prci11g1384 319 PIRSF ILK 4 274 - -
Prci11g1384 319 FunFam cysteine-rich receptor-like protein kinase 10 66 268 - -
Prci11g1384 319 SMART serkin_6 4 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1384 319 SUPERFAMILY Protein kinase-like (PK-like) 6 261 IPR011009 -
Prci11g1384 319 Gene3D Transferase(Phosphotransferase) domain 1 67 279 - -
Prci11g1384 319 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 13 316 - -
Prci11g1384 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 111 123 IPR008271 GO:0004672|GO:0006468
Prci11g1384 319 ProSiteProfiles Protein kinase domain profile. 1 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1384 319 Gene3D Phosphorylase Kinase; domain 1 2 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1384 Prci-Chr11 11749589 11751214 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1384 4 319 Receptor kinase-like Gene Family AT4G23150 56.962 1.11e-127 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g1384 PK_Tyr_Ser-Thr 9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1384 - - pop:7458565 396.741