Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1363 ATGTTTCAACAGCCAAGCATGTATGACTCTAGTATGCTGGATATGTCCCACAAGATGTCGGACAGTGATCTGGTGGGAAGGAAGACCAATGACGATGATTACGAGATCAAATCGGTGACTGAAACAACCATGGAAGCTCCTTCTGGTGACGACCAAGACCCCGACCAACGTCCCAAAAAGAAGCGCTACCACCGCCACACCCAGCGCCAAATACAGGAGTTGGAAGCCTTCTTCAAGGAGTGTCCCCACCCAGATGACAAACAAAGGAAAGAGCTGAGCCGTGAGCTGGGATTAGAGCCTTTGCAAGTCAAGTTTTGGTTCCAAAACAAGCGTACCCAAATGAAGGCACAACATGAACGCAGTGAGAATTCAATTTTGAAGGCTGAGAATGAAAAGCTTCGTGCGGAAAACAATAGGTACAAAGAAGCGCTAAGTAACGCTTCATGCCCCAACTGTGGGGGCCCTGCTGCTCTTGGTGAAATGTCCTTTGACGAGCAGCACCTCAGGATTGAGAATGCTCGTTTAAGAGAAGAGATAGATAGGATATCAGGAATTGCTGCCAAATATGTCGGAAAGCCTGTGACATCATTTTCTCTCCTTTCATCTAATCATGTTGCTTCACGCTCGCTCGAAGATCTTGGAGTTAGTAGTAACTTTATGTCACAATCAGGGACGGTTGGCGAAATGTACAGTGCGCGTAGTAGTGACCTTATTAGGTCACTGCCAGTGCCTTCTGAAGCTGACAAGCCCATGATTGTGGAGCTTGCTGTTGCAGCAATGGAGGAACTCATCAGGTTGGGTCAGGCTGGAGAGCCCTTCTGGGTTATCCCCAGTGACCACTCTTGTACCCACGAAGTTCTGAATGAAGAAGAATACTTGAGGACTTTTCCTAGGGGCATAGGTCCTAAACCCTTGGGACTGAGATCTGAAGCTTCCAGAGAATCCGCTGTGGTTATCATGAATCATATAAACCTTGTTGAGATTCTCATGGACGTGAATCAGTGGTCAAGGGTGTTTTGCAGCATCGTTTCAAGAGCAATGACACTTGAGGTCCTGTCAACGGGAGTGGCAGGGAACTACAACGGAGCTTTGCAAGTGATGTCTGCTGAGTTCCAAGTCCCTTCACCTCTTGTTCCTACAAGGGAAAACTACTTCGTCCGGTACTGTAAGCAGCATGCAGATGGGACATGGGCAGTGGTCGATGTTTCTCTGGACAACCTGCGACTTAGTGCTTTATCTAGAAGCAGAAGAAGGCCTTCTGGCTGTCTGATCCAAGAATTGCCAAACGGGTACTCGAAGGTTACTTGGATTGAACATGTTGAAGTGGATGATAGAAATTTGCACAATATATACAGACCCCTCGTCAATTCTGGCGTTGCCTTCGGAGCTAAACGTTGGGTGGCCACATTAGATAGACAATGTGAACGTATTGCTAGTTCTATGGCCTGCAACATACCTGCAGGAGACCTTTGCGTGATAACGAGTTCTGAGGGAAGGAAGAGTGTGCTGAAGCTTGCAGAGAGGATGGTGATGAGTTTCTGTGCTGGAGTAGGGGCTTCAACGGCACATGCATGGACGACACTATCAGCAACCGGGAACGATGATGTGAGGGTAATGACCAGAAAGAGTATGGATGATCCGGGCAGGCCTCCTGGTATAGTTCTCAGTGCTGCTACTTCTTTCTGGCTTCCAGTTCCTCCAAACACGGTCTTCAATTTCCTGCGAGATGAGAACTCTAGAAGCGAGTGGGATATTTTATCCAATGGAGGCATAGTCCAAGAAATGGCTCATATAGCAAATGGTCGTGATCCAGGCAACTTTGTCTCCCTACTTCGTGTCAATAGTGCAAATTCAAGCCAAAGCAACATGGTGATACTTCAGGAGAGCTGCACAGACGCAACGGGATCGTATGTGATATATGCCCCTGTAGATATAGTGGCCATGAACGCAGTGCTTGGAGGAGGAGACCCAGACTATGTTGCTCTCTTGCCCTCTGGTTTCGCCATTCTTCCTGATGGCTCTTCACTGAACAGCAACACTGGAGGAGGGCCTATTCTTGATGTTGGCTCAGGAGGTTCTCTTCTCACTGTTGCATTTCAGATCTTGGTTGATTCAGTGCCTACAGCTAAGCTATCTCTGGGCTCAGTTGCCACTGTTAACAGTTTGATTAAGTGCACTGTTGAAAGGATCAAAGCTGCAGTCATGTAA 2208 0.4769 MFQQPSMYDSSMLDMSHKMSDSDLVGRKTNDDDYEIKSVTETTMEAPSGDDQDPDQRPKKKRYHRHTQRQIQELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERSENSILKAENEKLRAENNRYKEALSNASCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPVTSFSLLSSNHVASRSLEDLGVSSNFMSQSGTVGEMYSARSSDLIRSLPVPSEADKPMIVELAVAAMEELIRLGQAGEPFWVIPSDHSCTHEVLNEEEYLRTFPRGIGPKPLGLRSEASRESAVVIMNHINLVEILMDVNQWSRVFCSIVSRAMTLEVLSTGVAGNYNGALQVMSAEFQVPSPLVPTRENYFVRYCKQHADGTWAVVDVSLDNLRLSALSRSRRRPSGCLIQELPNGYSKVTWIEHVEVDDRNLHNIYRPLVNSGVAFGAKRWVATLDRQCERIASSMACNIPAGDLCVITSSEGRKSVLKLAERMVMSFCAGVGASTAHAWTTLSATGNDDVRVMTRKSMDDPGRPPGIVLSAATSFWLPVPPNTVFNFLRDENSRSEWDILSNGGIVQEMAHIANGRDPGNFVSLLRVNSANSSQSNMVILQESCTDATGSYVIYAPVDIVAMNAVLGGGDPDYVALLPSGFAILPDGSSLNSNTGGGPILDVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVM 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1363 735 FunFam Homeobox-leucine zipper protein GLABRA 2 254 475 - -
Prci11g1363 735 ProSiteProfiles 'Homeobox' domain profile. 57 117 IPR001356 GO:0003677
Prci11g1363 735 CDD homeodomain 60 118 IPR001356 GO:0003677
Prci11g1363 735 MobiDBLite consensus disorder prediction 1 17 - -
Prci11g1363 735 Pfam Homeodomain 60 115 IPR001356 GO:0003677
Prci11g1363 735 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 56 734 IPR042160 -
Prci11g1363 735 Gene3D - 47 133 - -
Prci11g1363 735 SUPERFAMILY Bet v1-like 247 478 - -
Prci11g1363 735 SMART HOX_1 58 121 IPR001356 GO:0003677
Prci11g1363 735 Pfam START domain 255 476 IPR002913 GO:0008289
Prci11g1363 735 CDD START_ArGLABRA2_like 249 475 - -
Prci11g1363 735 ProSiteProfiles START domain profile. 245 479 IPR002913 GO:0008289
Prci11g1363 735 SMART START_1 254 476 IPR002913 GO:0008289
Prci11g1363 735 MobiDBLite consensus disorder prediction 1 68 - -
Prci11g1363 735 ProSitePatterns 'Homeobox' domain signature. 92 115 IPR017970 GO:0000981|GO:0006355
Prci11g1363 735 Coils Coil 111 146 - -
Prci11g1363 735 SUPERFAMILY Bet v1-like 497 731 - -
Prci11g1363 735 Gene3D - 316 481 IPR023393 -
Prci11g1363 735 MobiDBLite consensus disorder prediction 20 39 - -
Prci11g1363 735 SUPERFAMILY Homeodomain-like 44 117 IPR009057 -
Prci11g1363 735 FunFam Homeobox-leucine zipper protein HDG1 48 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1363 Prci-Chr11 11552034 11557479 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1363 4 734 Homeobox Transcription Factor Family AT4G21750 77.398 0.0 1172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci11g1363 START 2.8e-55 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1363 K09338 - qsu:112016283 1200.65