Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1357 ATGCATGTTTGCCTCTATATAAATAAGCACCACATCATTCAAGCAACACACAACACTCCAATCCTCCTCCTCTTCTCTACTATGGCTTCTTCCCACCAATCTCTCCTTGACAAACCCAAAAGGAACATTTCCAGAACCATCTGCCTCTCTCTCTTTCTAGCTGCCATCATTGGCTTCTCAGCCCTTGTTTCTTCTTATCTCTTCACATCCTCTTCTCCCTTCTCCTTCTTCAACCTCTCCTACCCTCATCATCATCTCTGTGATCATGCCCTCCACAAATCATCATGCCTTGCCCACGTCTCTGAATTAGCCAAAGCTTCAACCTTTAGTACGATCAAGGACCAAAAATCCAACTTGATTCAATCCTTCCTTATGAAATCCGCCGCACAAATCAAAAATGCCATTGACACAACCAAAGCCATTAAGTATAGAATTAACAACCCAAAAGAGCAGCAAGCTCTGCTAGACTGTGAGGGCCTTCTAGGCTTGTCAGTTGACAGAGTTTGGGACTCAATGATGGCTCTCACAAAACAGACCATCAAATCCCACGAAGATGCTCACACATGGTTAAGTAGTGTTCTCACTAATCATATAACTTGCTTGGATGGGCTAGAAGGGTCTGCCAGAACCCTTATGGAGACTGAGCTGAATGACTTAGTGTCCAGAGCAAGGACCTCCCTAGCCATGCTTGTTCATGTTTCGCCTTCTAAGGCTGATGATCCTATTGATGTGCCACTCGATGGAGAATTTCCCTCATGGTTGACGAGCAAGGATAGGAAGCTTTTGGAAACTACTTCTGCAAAGGACATTAAGGCCAACGTTGTGGTGGCTAAGGATGGGAGTGGCAAGTTTAGGACTGTGAACGAGGCTGTGGCGTCGGCACCTGATAATGGTAAGACGAGGTATGTTATTTATGTTAAGAAGGGAATTTATAAAGAGAATGTTGAGATTGGATCCAAGAAGAAGAATGTGATGCTTGTGGGTGATGGTATGGATGCCACTATCATCACTGGAAGCTTGAATTTTGTCGACGGAACACCCACCTTCAGAACCGCCACCGTCGCTGCGGTCGGGGATGGATTCATAGCGCAAGACATATGGTTCCAAAACACGGCAGGTCCACAGAAGCACCAGGCGGTGGCTCTCCGCGTCGGAGCCGATCTCTCCGTCATCAACCGCTGCCGGGTCGACGCCTTCCAAGACACTCTCTACGCCCACTCCAACCGGCAATTCTACCGTGACTCCTTCATCACAGGCACTGTCGACTTCATCTTCGGCAATGCCGCAGTCGTATTCCAGAAGTGCAGCCTTGTGGCGCGAAAGCCCATGAATAACCAGAACAACATGATCACAGCTCAAGGACGCGAAGACCCGAACCAGAACACAGGGACTTCCATCCAGCAATGTAACCTAACACCGAGCTCCGATCTCAAGCCTGTCGTGGGTTCAGTCAAAACCTTTTTGGGTCGTCCGTGGAAAGAGTACTCTAGAACTGTGGTGATGCAGTCATTCCTGGACAGCCACATTGACTCAACAGGATGGGCTCCGTGGGACGACAAGCAATCGACATTGAAGAATTTGTATTATGGAGAGTACATGAACAAGGGACCCGGTGCTGGGACTGCGAAGAGAGTGAAATGGCCTGGGTATCACGTGATTACAAGTGCTTCTCAGGCCAGCAAATTTACCGTGGCTCAGCTCATTCAAGGTGGGACTTGGCTGAAGAACACAGGGGTGGCCTTCATTGAGGGACTCTAG 1758 0.4841 MHVCLYINKHHIIQATHNTPILLLFSTMASSHQSLLDKPKRNISRTICLSLFLAAIIGFSALVSSYLFTSSSPFSFFNLSYPHHHLCDHALHKSSCLAHVSELAKASTFSTIKDQKSNLIQSFLMKSAAQIKNAIDTTKAIKYRINNPKEQQALLDCEGLLGLSVDRVWDSMMALTKQTIKSHEDAHTWLSSVLTNHITCLDGLEGSARTLMETELNDLVSRARTSLAMLVHVSPSKADDPIDVPLDGEFPSWLTSKDRKLLETTSAKDIKANVVVAKDGSGKFRTVNEAVASAPDNGKTRYVIYVKKGIYKENVEIGSKKKNVMLVGDGMDATIITGSLNFVDGTPTFRTATVAAVGDGFIAQDIWFQNTAGPQKHQAVALRVGADLSVINRCRVDAFQDTLYAHSNRQFYRDSFITGTVDFIFGNAAVVFQKCSLVARKPMNNQNNMITAQGREDPNQNTGTSIQQCNLTPSSDLKPVVGSVKTFLGRPWKEYSRTVVMQSFLDSHIDSTGWAPWDDKQSTLKNLYYGEYMNKGPGAGTAKRVKWPGYHVITSASQASKFTVAQLIQGGTWLKNTGVAFIEGL 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1357 585 PANTHER PECTINESTERASE 57 575 - -
Prci11g1357 585 Gene3D Invertase/pectin methylesterase inhibitor family protein 84 233 IPR035513 -
Prci11g1357 585 Pfam Pectinesterase 273 570 IPR000070 GO:0030599|GO:0042545
Prci11g1357 585 ProSitePatterns Pectinesterase signature 2. 417 426 IPR033131 -
Prci11g1357 585 ProSitePatterns Pectinesterase signature 1. 298 317 IPR018040 -
Prci11g1357 585 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 85 229 IPR035513 -
Prci11g1357 585 SUPERFAMILY Pectin lyase-like 271 584 IPR011050 -
Prci11g1357 585 Gene3D - 267 585 IPR012334 -
Prci11g1357 585 FunFam Pectinesterase 267 585 - -
Prci11g1357 585 Pfam Plant invertase/pectin methylesterase inhibitor 85 228 IPR006501 GO:0004857
Prci11g1357 585 NCBIfam pectinesterase inhibitor domain 85 209 IPR006501 GO:0004857
Prci11g1357 585 SMART PMEI_2 77 229 IPR006501 GO:0004857
Prci11g1357 585 CDD PMEI-like_4 94 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1357 Prci-Chr11 11522295 11524929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1357 26 585 Carbohydrate Esterase AT1G11580 55.614 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1357 K01051 - gmx:100815836 821.231