Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1331 ATGAAGCTCTTCAAAGTTGATCCTCCTCTCTCTGTTTTCGTGAGCTTCACGACGATCCTTGCAGTAATAATAACCAGTTCTAGAGCATCAGCCCAAACTGAGGAATATTATGACTGTCGAAACACAACCTTTTTCTCTTCCAATAGTGCCTATCAAACCAATCTCGACCATCTCCTTTCATGGCTTTCCACAAATTCCACCAGCCAAAACGGTTTCTACTACGCCACTGCCGGCGACTCCGACAACACTGTCTACGGTGCCTTCCTCTGCCGGGGAGATCTCGCCGCCGATGCCTGCCATGACTGCGCTTCCACAGCAGCCAAACAAATACTCCGAAAGTGTCCGTTCGATAAAAAGTCAGTACTCTGGTTCAACGAGTGTATGTTACGTTACTCAGACAAGCCTTTCTTCTCCACCAGTGAAGAAACCCCCCGTCTGATTTTGATGAATACTGCGACTAGCTTAAACCAGAGTAGCTTTATGTCGCTGTTGGGAGAAAATATCAACGCGGTGGCAGCGCAAGCGGTGAAGGGCGGAGCCGACAAGAAGTTTTCCACCAAAGAAGCGAAATTTTCTAATTTCCAAACACTGTACACGCTTGCACAGTGCACGCCAGATTTATCTGAAGCTACCTGCGATACATGCTTGAAAGGAGCAATTTCGAACTTACCCAGTTGCTGCAATGGAAAGATAGGGGCCAGAGTGCTGCATACAAGTTGTATTATCCGATACGAAACGTACCCGTTTTACCATCAGGCGCCGGTGGTGACCTCACAAGACCCAACGCCGAAAGGAAGAACCCGGATTTCTGTAGCCAAAATCGTTGCGATTGTGGCTCCAATATTGACTGTTTTGCTGCTTTTCTTCCTTCTCTGCTGGTTAATAACTAGAAGGGCAAACAAGAAGCATAAACCAGTGCCAGCTGAAGATGATGATGTTGAAATTTCCAGTGTGGATTACTTGCAGTTTGATCTCGAAACGGTTAAATTGGCCACAAATAACTTCTGCCATGACAATAAATTAGGAGAAGGAGGATTTGGTGAGGTTTTCAAGGGATCTCTTCCTAATGGGCAAGATATTGCAGTGAAGAGGCTTTCGTTAAGCTCTAGGCAGGGTGCAGAGGAATTCAAGAATGAGGTAGTTTTAGTGGCCAAGCTTCAACACAGAAACCTTGTTAGGCTATTGGGATTTTGCTTGGATGGAGAAGAGAAGATCCTCATATATGAGTTCATCCCCAACAAGAGCTTGGATCATTTTCTTTTCGATGAGGAAAGAAAGAGTATGTTGAATTGGCCAAAACGATATAAGATTATACAAGGAATTGCTCGGGGATTACTTTATCTTCATGAAGACTCTCGACTTAAAATCATACATCGTGATCTTAAAGCTAATAATATATTATTAGATGAGGAGATGAATCCAAAAATTACAGATTTTGGTATGGCAAAAATTTTTGGTCTTAGTCAAACTCAAGGATACACAGACAGAATTGTGGGAACATTCGGCTACATGTCTCCAGAATATGCAATGCATGGACAATTGTCCACAAAAGTGGATGTGTACAGCTTTGGTGTGTTGATTTTGGAAATAATAAGTGGACAAAAGAGCACATCCTTTCATGAATCCAACTACGATGAACATCTGTTGAACTTTGCCTGGAGAAAGTGGAGAGATGGGACGTCATTGGAAGTGTCAGACATGAGTTTGAGAGATTCTTATACTAGAGAGGAAGTGAGCAGATGTATCCAGATTGCGTTGTCATGTGTACAGGAAGATCCAGCTCGAAGGCCAACAATGCAGGGAATAGTTCTGGTCCTCAACAGTTACTCAGTTAGTGTAGCAATACCTGAGGGGCCTCCATTTTTGGTTCATAGCAGAACTGTTGAGCCCAGCCTTCGATTGGAATCAGATAAGTCTTCTATAAACAAATCAGTCTCAGACTCTGTTGATGAAGCTTCCATTACTCAAGTGTACCCCCGATAG 1983 0.4352 MKLFKVDPPLSVFVSFTTILAVIITSSRASAQTEEYYDCRNTTFFSSNSAYQTNLDHLLSWLSTNSTSQNGFYYATAGDSDNTVYGAFLCRGDLAADACHDCASTAAKQILRKCPFDKKSVLWFNECMLRYSDKPFFSTSEETPRLILMNTATSLNQSSFMSLLGENINAVAAQAVKGGADKKFSTKEAKFSNFQTLYTLAQCTPDLSEATCDTCLKGAISNLPSCCNGKIGARVLHTSCIIRYETYPFYHQAPVVTSQDPTPKGRTRISVAKIVAIVAPILTVLLLFFLLCWLITRRANKKHKPVPAEDDDVEISSVDYLQFDLETVKLATNNFCHDNKLGEGGFGEVFKGSLPNGQDIAVKRLSLSSRQGAEEFKNEVVLVAKLQHRNLVRLLGFCLDGEEKILIYEFIPNKSLDHFLFDEERKSMLNWPKRYKIIQGIARGLLYLHEDSRLKIIHRDLKANNILLDEEMNPKITDFGMAKIFGLSQTQGYTDRIVGTFGYMSPEYAMHGQLSTKVDVYSFGVLILEIISGQKSTSFHESNYDEHLLNFAWRKWRDGTSLEVSDMSLRDSYTREEVSRCIQIALSCVQEDPARRPTMQGIVLVLNSYSVSVAIPEGPPFLVHSRTVEPSLRLESDKSSINKSVSDSVDEASITQVYPR 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1331 660 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 656 - -
Prci11g1331 660 SUPERFAMILY Protein kinase-like (PK-like) 320 632 IPR011009 -
Prci11g1331 660 CDD STKc_IRAK 341 607 - -
Prci11g1331 660 ProSiteProfiles Gnk2-homologous domain profile. 142 249 IPR002902 -
Prci11g1331 660 Pfam Protein kinase domain 338 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1331 660 FunFam cysteine-rich receptor-like protein kinase 10 411 613 - -
Prci11g1331 660 FunFam Cysteine-rich receptor-like protein kinase 10 144 249 - -
Prci11g1331 660 Gene3D Phosphorylase Kinase; domain 1 296 410 - -
Prci11g1331 660 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 32 136 - -
Prci11g1331 660 FunFam Cysteine-rich receptor-like protein kinase 10 296 410 - -
Prci11g1331 660 Pfam Salt stress response/antifungal 156 247 IPR002902 -
Prci11g1331 660 Pfam Salt stress response/antifungal 39 133 IPR002902 -
Prci11g1331 660 SMART serkin_6 335 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1331 660 ProSiteProfiles Gnk2-homologous domain profile. 33 136 IPR002902 -
Prci11g1331 660 Gene3D Transferase(Phosphotransferase) domain 1 411 614 - -
Prci11g1331 660 Gene3D - 32 136 IPR038408 -
Prci11g1331 660 Gene3D - 145 249 IPR038408 -
Prci11g1331 660 ProSiteProfiles Protein kinase domain profile. 335 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1331 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Prci11g1331 660 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1331 Prci-Chr11 11310910 11314043 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1331 14 660 Receptor kinase-like Gene Family AT4G05200 48.214 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g1331 Pkinase 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1331 - - cit:127900229 725.317