Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1328 ATGCCTTACCTCCACTTCACATTCCATCTCTTTCTCAGCTTCCTTCCATATTCCGCCGCAGCGATGGCTGAAGCACATGACGGTGTTTATTTTCACACTAAAGAGCCTCCCGTTTATCTCTACCACTTCTGCTCAACCAACAAAAACTTCACTCCCAATAGTTCCTACCATTTCAACCTCAACACTGTCCTTTCCTCTTTATCTTCTCACGCCACCGGCGCCGCTGAATTCTACAACACCACAGTCAACGGAGGAGACGGAATCGCCACTGAGGCAATCTATGGCCTCTTCCTGTGTCGCGGCGACATCACACGTCAGATGTGCAAAAAATGCCTCGAATTGGCGATCCAGAGAATTGCGTCGCGCTGTTTCTACTCTAAAGAGGCCATCGTTTGGTATCACGAGTGCTTAGTTCGGTATTCGAATCGTTCCATCTTCTCCGCCTTGGAGGAATGGCCGAGGCTTAAGCTCGTGAATATCAGTACGATTCCAAAATCACCAGAGCAACGCAGCGTCGGGTGGGTGTTGGCAAACACGTTGAACGAGGCTCTGGCAGAGGCGACGGATGGTGTGGAGGCAGGCGAGAAGAAATTTGCGACGAGGACGGGAAAATCGGGGAATCAAAGGGTGTACGCTCTGGTGCAGTGCTCGCCGGATCTGAGGAGCGGAGATTGCCGGAGATGTCTGAGGGATATGATGGGAGATATTTCGTTGTGTTGCCTTGGAAGAGAGAGCGGGATGGTTCTGTATCCTAGCTGCAGTCTCATGTTTGGATCGCGACTCTTTTACAGAGAAGTTGAAGTCGTGCGCCGTCGTCCTGCTCGTGTTCCACCTGACTCTGTTCCGATTGATGGTGGCCAAGGAGACCCAACGCGGGAAGGAGCGAGGACAGTCAGACCACGGATCATTATCATGGTGGTCATCCCAGTTGTTCTCACAGTCCTGCTGTTCTATTTTGTCATCTATTCGCTAAGAAGAAAAGCAAGGAAGAGATATGCGATTCTCAAAGAAAACTTTGGAACTGAATGTACTACTTTGGAGTCACTACAATTCGATTTTGCCACAATTGAAGCAACAACAAATAGGTTTTCAATTCGCAACAGGATAGGCCGAGGAGGATTTGGGGAAGTTTACAAGGGTACTCTATCTAATGGACAAGAGATAGCTGTGAAGAGACTTTCTGCAAGCTCTGCGCAAGGCATGATGGAATTTAAGAATGAGATTTTACTGATAGCTAATCTTCAACATAGAAACCTAGTGAGACTGTTGGGATTTTGCTTACAAGAGCATGAGAAGATACTTGTTTACGAATTCATACCCAATAAGAGCCTTGACTACTTTTTGTTTGATTCCCAAAAGAAAAAGCTATTAAATTGGTCTAAGCGCTTTAAAATCATCAAAGGAGTTGGTCGGGCAATTCTTTATCTTCATGAACATTCACGCCTTAAAATTATACATCGTGATCTCAAACCTAGCAATATATTATTGGATGAAAACATGAATCCCAAACTTTCTGATTTTGGGATGGCAAGAATGGTGGCAATAGATCAAGAGCAAGAATGTACAAGAAGAATAGTAGGGACATACGGTTATATGCCTCCTGAGTATGTAAATTTTGGAAAATATTCAGAGAAATCAGATATTTTTAGTTTTGGAGTCATGATCCTTGAGATTATATGTGGAAGGAAAAATTCTAGATCTTATGAATTGCCTAACATGGATGGCCTTCTGACTTATGCTTGGAAGCAATGGAAGTGTGAGACACCAATGGAAATAATGGATCCGAATTTGAAAGAATCTTGCTGTGAAACCGAAGTGATTAAGTGCATCCAGATTGGGTTACTGTGTGTTCAAGAGAAAGCAGAGGACAGGCCTCCAATGTCAAGAGTTGTTTCTTATTTAAGCGATCTTTCAGTAGAATTACCATTTCCTCGCGAACCCGCATTTTTTGAACTTGGTAGGACGGAGCCAGATTCGGGTCATCGATCTGCCAACAATTCCATTCCATCTTCTATCAATGAAATGTCTATAACTAGATCCTTTCCTCGTTAG 2052 0.4425 MPYLHFTFHLFLSFLPYSAAAMAEAHDGVYFHTKEPPVYLYHFCSTNKNFTPNSSYHFNLNTVLSSLSSHATGAAEFYNTTVNGGDGIATEAIYGLFLCRGDITRQMCKKCLELAIQRIASRCFYSKEAIVWYHECLVRYSNRSIFSALEEWPRLKLVNISTIPKSPEQRSVGWVLANTLNEALAEATDGVEAGEKKFATRTGKSGNQRVYALVQCSPDLRSGDCRRCLRDMMGDISLCCLGRESGMVLYPSCSLMFGSRLFYREVEVVRRRPARVPPDSVPIDGGQGDPTREGARTVRPRIIIMVVIPVVLTVLLFYFVIYSLRRKARKRYAILKENFGTECTTLESLQFDFATIEATTNRFSIRNRIGRGGFGEVYKGTLSNGQEIAVKRLSASSAQGMMEFKNEILLIANLQHRNLVRLLGFCLQEHEKILVYEFIPNKSLDYFLFDSQKKKLLNWSKRFKIIKGVGRAILYLHEHSRLKIIHRDLKPSNILLDENMNPKLSDFGMARMVAIDQEQECTRRIVGTYGYMPPEYVNFGKYSEKSDIFSFGVMILEIICGRKNSRSYELPNMDGLLTYAWKQWKCETPMEIMDPNLKESCCETEVIKCIQIGLLCVQEKAEDRPPMSRVVSYLSDLSVELPFPREPAFFELGRTEPDSGHRSANNSIPSSINEMSITRSFPR 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1328 683 MobiDBLite consensus disorder prediction 652 683 - -
Prci11g1328 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Prci11g1328 683 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 47 679 - -
Prci11g1328 683 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 324 438 - -
Prci11g1328 683 SMART serkin_6 363 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1328 683 Pfam Protein kinase domain 365 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1328 683 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 37 144 - -
Prci11g1328 683 ProSiteProfiles Protein kinase domain profile. 363 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1328 683 CDD STKc_IRAK 369 637 - -
Prci11g1328 683 Gene3D Phosphorylase Kinase; domain 1 325 438 - -
Prci11g1328 683 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Prci11g1328 683 MobiDBLite consensus disorder prediction 659 683 - -
Prci11g1328 683 ProSiteProfiles Gnk2-homologous domain profile. 158 262 IPR002902 -
Prci11g1328 683 FunFam cysteine-rich receptor-like protein kinase 10 439 641 - -
Prci11g1328 683 Pfam Salt stress response/antifungal 44 142 IPR002902 -
Prci11g1328 683 Pfam Salt stress response/antifungal 178 258 IPR002902 -
Prci11g1328 683 ProSiteProfiles Gnk2-homologous domain profile. 38 145 IPR002902 -
Prci11g1328 683 SUPERFAMILY Protein kinase-like (PK-like) 349 658 IPR011009 -
Prci11g1328 683 Gene3D Transferase(Phosphotransferase) domain 1 439 641 - -
Prci11g1328 683 Gene3D - 168 262 IPR038408 -
Prci11g1328 683 Gene3D - 37 144 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1328 Prci-Chr11 11294036 11303651 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1328 37 683 Receptor kinase-like Gene Family AT4G05200 43.609 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g1328 Pkinase 7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1328 - - lang:109335395 758.059