Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1325 ATGGTAATTTATGCAGGAAAACATAAAGGCCAATCACGGACAATTATAATAGTGGTGGTCCTTATTGTTGTTTCAATCATGCTTACTTGCTCTGGCTATTATTGTTGGCGTAGAAAACACAGCAAGAGTTACAAGGCTATTCTGGAGAAAAATTTTGGAAGTGAAGGTGCTACATTAGAGTTGTTGAAATTCAATTTAACTACAATTGAAGCTGCAGCAACGGACAAGTTTTCTGCTGAAAATAGAATAGGAAGGGGAGGATTTGGAGAAGTCTACAAGGGCATCCTTCCTGATGGCAAAGAAATAGCAGTGAAGAGATTGTCTGAGAGTTCTCGACAAGGTTTAACTGAATTCAAGAACGAAGTTCTACTAATTGCTAGACTTCAGCACAGAAACCTGGTTGCATTATTAGGATTTTGCTTAAATGACCAAGAGAAAATACTTGTTTATGAATATGTTCCTAAGAAGAGCCTAGATTTCTTTTTATTTGGTTCCAAAAAGGAAAGATCATTAAATTGGTCAGAGCGTTTCAAAATTATCAGAGGAGTTGCTCGGGGAATTCTTTATCTTTATGAATATTCTCACCTTAAAGTAATTCATCGAGATCTCAAACCAAACAACATTTTATTAGATGATGAAATGAATCTAAAAATTTCTGATTTTGGCTTAGCAAGAATGGTTGGTATTAATGAAACTAGAGGAAGCACAAATAAAATTGTTGGAACCCTGTTTCTCTCACGCACACAAACATCTCTTTCTCTCTATCCATAA 771 0.3541 MVIYAGKHKGQSRTIIIVVVLIVVSIMLTCSGYYCWRRKHSKSYKAILEKNFGSEGATLELLKFNLTTIEAAATDKFSAENRIGRGGFGEVYKGILPDGKEIAVKRLSESSRQGLTEFKNEVLLIARLQHRNLVALLGFCLNDQEKILVYEYVPKKSLDFFLFGSKKERSLNWSERFKIIRGVARGILYLYEYSHLKVIHRDLKPNNILLDDEMNLKISDFGLARMVGINETRGSTNKIVGTLFLSRTQTSLSLYP 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1325 256 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 243 - -
Prci11g1325 256 SUPERFAMILY Protein kinase-like (PK-like) 68 243 IPR011009 -
Prci11g1325 256 SMART serkin_6 77 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1325 256 Gene3D Phosphorylase Kinase; domain 1 36 152 - -
Prci11g1325 256 Gene3D Transferase(Phosphotransferase) domain 1 153 246 - -
Prci11g1325 256 Pfam Protein kinase domain 79 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1325 256 ProSitePatterns Protein kinases ATP-binding region signature. 83 105 IPR017441 GO:0005524
Prci11g1325 256 ProSiteProfiles Protein kinase domain profile. 77 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1325 256 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 37 152 - -
Prci11g1325 256 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Prci11g1325 256 FunFam Os07g0541700 protein 153 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1325 Prci-Chr11 11239893 11241252 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1325 3 242 Receptor kinase-like Gene Family AT4G05200 52.049 7.23e-81 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g1325 Pkinase 5.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1325 - - pcin:129286968 375.555