Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1318 ATGACGTCCATGGTCATGGCTTCCTACAAAATTGCCTTACTCTTCTTCTTCATTACCTCCCTCCATTCTCCTACTTCCGACGCACAGACTTACCTTGACCACAACTGCTCTTCCAACAAAACCTTCGCTGCCAATAGCGCCTTTCAATCGGACCGGACTGCACTTCTCTCTTCCTTAGCTTCCAACAACACCACCAACACCGAATTCTACAACGCCACCGTTTCCGGTGGCGGCGACACCGTTTACGGCCTCTTCATGTGCCGGGGTGACGTCAACCTCTCGGTGTGCCACCAATGCGTCGTTAACGCAACCCAACGATTAACTTCCAAGTGCCGAGCTTCGAAGGAGGCAATAGTCTGGTACGATGAGTGCTTGCTTCGCTATTCCAACCGCTCCTTCTTCTCCACCGTCGACACAAGGCCTAGACTTGGCCTCTTGAACACCGGCAACGTCTCCAACCAGGCAAGCTTCATGAGAACATTGTACGATACGATGAACAAGACGGCAGACGAGGCAGCGAAACCTGCCGTGGGGCAAAAGAAGTATGCGACGGGAACAGCGAATTTTTCAGCGTTCCAAACGGTGTATTGTCTAGCTCAGTGCACGCCGGATCTTTCGCCGGGAGATTGCAGAAGGTGTCTGAGTGGCGTGATTGGGGACCTTGACTGGTGTTGTGATGGGAAGCAAGGAGGAAGAGTTCTATACCCTAGCTGTAATGTTCGCTATGAATTGTACCCTTTCTATCAATCGGCAGCTCAAGCACCAACTCCGTCACCGGCAATTGTTCCTCCGACTTATACTACAGGTTCCCAAGGAAAAAGTGGGATCTCATCAGGGACGATTGTTGCGATTGTGGTTCCGATTTCAGTGGCTGTCCTGATATTTATAGTCGGCATTTGTTGCTTGAGTAAGAGAATGAGGAAGAAGTATGACTCTGTTCCCCATGGAAAATCTGCAAGTGACATCAGCAATGTGGATTCACTGCAATATGATTTCAGTACAGTTGAAGCAGCCACGGACAAGTTCTCTGCAGATAACAAGCTTGGTGAAGGCGGATTTGGAGAAGTTTACAAGGGCATACTTCCAAATGGGCAAGAAATTGCTGTGAAGAGACTCTCTAGAAGCTCTGGACAAGGTGTACAAGAATTTAAGAATGAAGTAGAAGTGGTTGCCAAGCTACAACACAGAAATTTAGTGAGGCTTCTGGGTTTCTGTGTGCAAGGAGAAGAGAAGATACTTGTTTATGAATATGTGCCCAACAAAAGTCTTGATTACGTTCTTTTTGACCCTGCAAAGCAAAGACAACTAGATTGGACAAAGCGTTACAAGATTGTCAAAGGAATTGCTCGGGGCATTCAATATCTTCATGAAGATTCAAGGCTTAAAATTATACATCGTGATCTTAAAGCTAGCAATGTGTTATTGGATAGTGATATGAGTCCAAAAATCTCAGATTTTGGTATGGCAAGAATTTTTATGGTGGACCAAACGCAAGGAAACACCAGTCACATTGTTGGAACATATGGTTACATGTCTCCGGAATACGCCATGCACGGGGAGTTTTCTGTTAAGTCTGATGTATACAGCTTTGGTGTCCTTCTAATGGAGATTATAAGTGGGAAGAAGAATAGTTCTTTCTATCAAATGGAGGGTGCTGAGGACCTGCTGAGCTATGCCTGGAAACTTTGGAAGGATGGAGAGCCCTTGGGACTGTTGGATCCCATAATAAGAGAATCTTGTACTCCAAATGAAGTTATGAGATGTGTTCACATTGGTCTTCTGTGTGTTCAAGAAGATCCAGCAGAAAGACCTACAATGGCTTCCATAGTTCTGATGCTTGATAGTTACTCCGTGACTCTGCCAACCCCTTCGCAGCCTGCATTTTTTATGCAAAGTGGAACTGATCCTAACATGCCAAAAGGCTTTCAATTTGGTCAATCTACGACCAAGTCAGCACCAATGTCAGTCAATGAGATGTCTGTTAGTGAAGTAATTCCTCGGTAA 2004 0.4576 MTSMVMASYKIALLFFFITSLHSPTSDAQTYLDHNCSSNKTFAANSAFQSDRTALLSSLASNNTTNTEFYNATVSGGGDTVYGLFMCRGDVNLSVCHQCVVNATQRLTSKCRASKEAIVWYDECLLRYSNRSFFSTVDTRPRLGLLNTGNVSNQASFMRTLYDTMNKTADEAAKPAVGQKKYATGTANFSAFQTVYCLAQCTPDLSPGDCRRCLSGVIGDLDWCCDGKQGGRVLYPSCNVRYELYPFYQSAAQAPTPSPAIVPPTYTTGSQGKSGISSGTIVAIVVPISVAVLIFIVGICCLSKRMRKKYDSVPHGKSASDISNVDSLQYDFSTVEAATDKFSADNKLGEGGFGEVYKGILPNGQEIAVKRLSRSSGQGVQEFKNEVEVVAKLQHRNLVRLLGFCVQGEEKILVYEYVPNKSLDYVLFDPAKQRQLDWTKRYKIVKGIARGIQYLHEDSRLKIIHRDLKASNVLLDSDMSPKISDFGMARIFMVDQTQGNTSHIVGTYGYMSPEYAMHGEFSVKSDVYSFGVLLMEIISGKKNSSFYQMEGAEDLLSYAWKLWKDGEPLGLLDPIIRESCTPNEVMRCVHIGLLCVQEDPAERPTMASIVLMLDSYSVTLPTPSQPAFFMQSGTDPNMPKGFQFGQSTTKSAPMSVNEMSVSEVIPR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1318 667 SMART serkin_6 342 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1318 667 FunFam Cysteine-rich receptor-like protein kinase 25 141 247 - -
Prci11g1318 667 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Prci11g1318 667 CDD STKc_IRAK 348 614 - -
Prci11g1318 667 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 22 663 - -
Prci11g1318 667 SUPERFAMILY Protein kinase-like (PK-like) 328 632 IPR011009 -
Prci11g1318 667 Pfam Protein tyrosine and serine/threonine kinase 344 611 IPR001245 GO:0004672|GO:0006468
Prci11g1318 667 MobiDBLite consensus disorder prediction 646 667 - -
Prci11g1318 667 ProSiteProfiles Gnk2-homologous domain profile. 139 247 IPR002902 -
Prci11g1318 667 FunFam Cysteine-rich receptor-like protein kinase 10 304 417 - -
Prci11g1318 667 Gene3D Transferase(Phosphotransferase) domain 1 418 621 - -
Prci11g1318 667 Pfam Salt stress response/antifungal 36 130 IPR002902 -
Prci11g1318 667 Pfam Salt stress response/antifungal 150 245 IPR002902 -
Prci11g1318 667 FunFam cysteine-rich receptor-like protein kinase 10 418 620 - -
Prci11g1318 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Prci11g1318 667 Gene3D - 142 247 IPR038408 -
Prci11g1318 667 Gene3D - 28 133 IPR038408 -
Prci11g1318 667 ProSiteProfiles Gnk2-homologous domain profile. 30 133 IPR002902 -
Prci11g1318 667 Gene3D Phosphorylase Kinase; domain 1 303 417 - -
Prci11g1318 667 ProSiteProfiles Protein kinase domain profile. 342 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1318 667 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 29 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1318 Prci-Chr11 11161732 11165295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1318 1 667 Receptor kinase-like Gene Family AT4G05200 50.441 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g1318 PK_Tyr_Ser-Thr 2.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1318 - - gmx:100305391 954.51