Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1315 ATGTCCTTCTCCAAATTCTCTGCAACACAATTCATACTTCTCGCTCTGTTTCTATTTCTGAGTTTAACAAGTGAAGCATCTCCTATTTTCAGCACCAACGCCTGTACAGACTCAGTCACTTACAAGCCCAACGGCACATTTGAATCCAATTTGAACGTCCTCCTATCTGTTCTTACCTCCAACGCCTCCCTCCACGACGGTTTCTACCGTACCACCTTGGCTCAGGGCACTCCCTCCATCATCAACGGCCTTTTCCTCTGCCGCGGCGATGCCACCCCCGACCTGTGCCATGAGTGCGTAGCCGACGCCGCCAAAGAGATAAGACGCCAGTGTCCCAACCAAACGGAGTCTATCATCTGGTACGATGTTTGTCTTCTTCGCTACTCGAACAACTCCTTCAACAACATCGTCCCTTCCACGCACTTGTCGGATAACGGCAGTATATCTAGCGCTGAACAGGGTCAGTTCGATCAATTGTTGTCAAACATGTTGCAAAATTTGACGGCAGAAGCTAAAGATTCCCAGACGGGGAAGAAATTCGCTGTGGGACAAGTAAACCTAACGTCGTCACAAACGTTGTACGGCCTAGTACAGTGTTACCCTGACCTGACGTCTTTTGATTGCAACATGTGTCTCCAAGGAGCCATTGGAAATCTGCCAAATTGCTGTAGCAACAAGAAGGGGGCAAGCGTTCTGTTTCCAGCATGTATCATTAGATATGAACTCTACCCATTTTACAACATAACCTTGACATCACTACCAGTTCCTCCTCGATCAGGAAAAAGCAATATCTCAGTAATTGTTGCGACTACTGTGCCGATTGTTGCTTCTGTGACACTTTTTGTTGCGGCTTGCTGTTTCCTCCGTAAGAGGGCTGGCAAGAACAGGAAGTATACTTTCACGGAAGATGACCTTCGAAATGATCTTACCGACATAGAGTCTCTGCAATTTGAATTGGCAACAATAGAAGCTGCAACGAAAGGGTTCTCAGATGAGAACAAGATTGGTCAAGGTGGATTTGGTTCAGTTTATAAGGGTATCCTCCCAAACGGACAGGAGATTGCAGTGAAAAGGTTGTCGGTAACCTCCTTGCAGGGTGCTGTGGAATTTAAGAATGAAGCTGCTCTTGTGGCCAAGCTTCAGCACAGAAATTTAGTGAGGCTATTGGGATTTTGCTTGGAGGGCCAAGAGAAGATACTCATTTATGAATACATCCCAAACAAAAGCCTTGATCACTTCCTATTTGATTCTGAAAAGAAAGGAATGCTTGATTGGTCAAGACGTTATAAGATCATAATGGGAATTGCTAGAGGAATTCTTTATCTACATGAAGATTCTCAACTTAGAATAATACATCGTGATCTCAAAGCAAGTAATGTTTTATTAGATGACAACATGAAACCAAAGATTTCAGATTTTGGCATGGCAAAAATCTTTCATGGAGAACAAACTCAAGTAAATACGGGAAGAATAGTTGGAACCTTTGGTTATATGTCTCCAGAGTATGCAATGCGCGGGCAATTTTCTGTGAAATCAGATGTGTTTAGCTTTGGTGTCCTAGTTTTGGAGATTGTTACTGGCAAGAAGAACACAGACTTTTATCAATCACAGCAAGCCGATGACCTCTTAAGCTATGCCTGGACAAACTGGACACACAAAACACCTTTGGAGTTGGTGGATCCAACACTGGGAGGTTCATATTCAAGAAATGAAGTCACAAGATGCATTCATATTGCCCTGCTCTGTGTTCAGGAGAATCCTTCTGATAGACCTTCAATGGCAACTATAGCACTTATGCTCAGCAGCTACTCTGTTACTTTGTCACTACCTCGACAGCCAGCAACTTACATGCGCAGGACACCAAACAGGCAAAATAATGGTGTTGATTCTGATCAATCTACCTCTTCAATCCTATGGTCTACAAACGAAGCATCTATTACAGAATTGTACCCCCGATAA 1959 0.438 MSFSKFSATQFILLALFLFLSLTSEASPIFSTNACTDSVTYKPNGTFESNLNVLLSVLTSNASLHDGFYRTTLAQGTPSIINGLFLCRGDATPDLCHECVADAAKEIRRQCPNQTESIIWYDVCLLRYSNNSFNNIVPSTHLSDNGSISSAEQGQFDQLLSNMLQNLTAEAKDSQTGKKFAVGQVNLTSSQTLYGLVQCYPDLTSFDCNMCLQGAIGNLPNCCSNKKGASVLFPACIIRYELYPFYNITLTSLPVPPRSGKSNISVIVATTVPIVASVTLFVAACCFLRKRAGKNRKYTFTEDDLRNDLTDIESLQFELATIEAATKGFSDENKIGQGGFGSVYKGILPNGQEIAVKRLSVTSLQGAVEFKNEAALVAKLQHRNLVRLLGFCLEGQEKILIYEYIPNKSLDHFLFDSEKKGMLDWSRRYKIIMGIARGILYLHEDSQLRIIHRDLKASNVLLDDNMKPKISDFGMAKIFHGEQTQVNTGRIVGTFGYMSPEYAMRGQFSVKSDVFSFGVLVLEIVTGKKNTDFYQSQQADDLLSYAWTNWTHKTPLELVDPTLGGSYSRNEVTRCIHIALLCVQENPSDRPSMATIALMLSSYSVTLSLPRQPATYMRRTPNRQNNGVDSDQSTSSILWSTNEASITELYPR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1315 652 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Prci11g1315 652 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 133 - -
Prci11g1315 652 SUPERFAMILY Protein kinase-like (PK-like) 315 634 IPR011009 -
Prci11g1315 652 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 289 404 - -
Prci11g1315 652 CDD STKc_IRAK 335 600 - -
Prci11g1315 652 ProSiteProfiles Gnk2-homologous domain profile. 138 245 IPR002902 -
Prci11g1315 652 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 651 - -
Prci11g1315 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Prci11g1315 652 Pfam Protein tyrosine and serine/threonine kinase 332 597 IPR001245 GO:0004672|GO:0006468
Prci11g1315 652 Gene3D - 139 245 IPR038408 -
Prci11g1315 652 Gene3D - 29 133 IPR038408 -
Prci11g1315 652 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Prci11g1315 652 FunFam Cysteine-rich receptor-like protein kinase 10 139 245 - -
Prci11g1315 652 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Prci11g1315 652 Pfam Salt stress response/antifungal 151 243 IPR002902 -
Prci11g1315 652 Gene3D Phosphorylase Kinase; domain 1 291 404 - -
Prci11g1315 652 FunFam cysteine-rich receptor-like protein kinase 10 405 607 - -
Prci11g1315 652 ProSiteProfiles Protein kinase domain profile. 329 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1315 652 Gene3D Transferase(Phosphotransferase) domain 1 405 610 - -
Prci11g1315 652 SMART serkin_6 329 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1315 Prci-Chr11 11148651 11152255 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1315 13 652 Receptor kinase-like Gene Family AT4G05200 48.281 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g1315 PK_Tyr_Ser-Thr 5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1315 - - gmx:113000776 881.708