Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1313 ATGGCTGGCGTCTCAGAGACTAACAGAATCATTACTATAACCAACTCTTCCTTCAACCTCATCCTCCTTCTTATGTTTCTTTGCTTCCTCTGTTCTCCCATCTCTGAAGCAGCAGAAGCCCCCATTTTCCTTCGGCAAAACTGCACAGGCACCGAAACCTTCGCTCAAAACAGTACCTTCCACTTCAACCTCAGAACCCTCCTCGATTCCTTAGCTTCCCACGCCACTGGCCACATCCAATTCTTCAACAACACCGTTACCACCGCCGCTGTCAGAAACCACTCCGACACCGTCTATGGCCTCTTCATGTGCCGTGGTGACGTCCCCCAGGACCTCTGTGAAGAATGCGTTTTTAACGCTACTCACAGATTCGGAGCCTCCTCTGGCACGTGTCCGTTTTCCAAAGGGGCTATACTCTGGTACGATGAGTGCATGGTTCGGTATTCCAACCAGTATTTCTTCTCAAAGATGGAGACAAGGCCGAGAATGCGCCTCAGGAACATCGGCAATGTCACCGACAATGTTAAAGAAAGGTACATGCGTTTAATGTATACAACCTTAAACGAAACGGCAGACAAGGCAGCGAAAGCTCCGATAGGGGTTGAGAAATATGCGACGAAGACATCCAATCTTTCTGCATTTCAGACGCTGTACTGTCTGACACAGTGCACGCCGGACCTGTCTCCCCAAGATTGCAGAAAGTGTTTGAGTCTTGTGATTGAGGATGTTGCGTGGTGCTGCACTTACAGGATCGGAGGAAGAGTTCTTTATCCAAGTTGCAACTTCAGGTATGAATTGTACCCTTTCTATAGACAACAGGCTTCAGTGGCTCCGACTCTCGCACCACCAGCACTTGTGAATTCTACACCTTCGTCGGAAGACAAAGGTAAAAGTGGGAAATCTTCTGGGACAGTTGTTGCAACTGTGGTTTCAATTACAGTGGCTGTGCTGCTGTTTATAGTGGGAGTTTGTTTCTTGAGCAAAAGAACAAGGAAAGAGTATGACACTGTGGCAGATGGAAATTCTGCAAATGACATCGCTACTTTGGACTCACTGCAATATGATTTCAGTACTATTGAAGCCGCCACAAACAAGTTCTCTGCAGATAACAAGCTTGGTGAAGGTGGATTTGGAGAGGTTTACAGGGGTATGCTTCCAAATGGACAAGAAATCGCTGTTAAGAGGCTCTCCCAAGGCTCTGGACAAGGTGGAGAAGAATTTAAGAATGAAGCAATGGTGGTTGCCAAGCTTCAACACAGAAATTTAGTGAGGTTTCTGGGATTCAGCTTGCAAGGACAAGAGAAGATACTCATTTATGAGTATATGCAAAACAAAAGTCTTGATTACATTATTTTTGATCATGAGAAGCAAAGACAATTGAATTGGAGACAACGTTATGAGATTATCAAAGGGATTGTTCGAGGCATTCAATATCTTCATGAAGATTCAAAATTTAAAATCATACACCGTGATCTTAAAGCCAACAATATATTGTTAGATAGTGATATGAACCCAAAAATATCAGATTTTGGTATAGCAAGAATTTTTAGTATTGATCAGACTCAAGGAAATACTAGTCGAATTATTGGCACATATGGTTATGTATCACCAGAATATGCTATGCATGGAAAATTCTCTGTTAAATCCGATGTATACAGCTTTGGTGTCCTCCTCATGGAAATTATTAGTGGAAAGAAGAATAGCTCTTTCCATCAAACAGACGGTGCTGTGGACCTTTTGAGCCACGCTTGGAAACTTTGGAAGGATGAAACACCCTTGGAATTGCTGGACCCCACATTGATAGAATCTTACACTCCAAATGAAGTTATCAGATGCATCCACATTGGTCTATTGTGCGTTCAAGAAGATCCAACAGATAGACCTACAATGGCATCTATAGCTCTGATGCTTGATAGTTACTCTGTGACTCTGCCAACCCCCTTGCAGCCTGAATTTTTTGTCCCCAGTTATAATTGA 1977 0.435 MAGVSETNRIITITNSSFNLILLLMFLCFLCSPISEAAEAPIFLRQNCTGTETFAQNSTFHFNLRTLLDSLASHATGHIQFFNNTVTTAAVRNHSDTVYGLFMCRGDVPQDLCEECVFNATHRFGASSGTCPFSKGAILWYDECMVRYSNQYFFSKMETRPRMRLRNIGNVTDNVKERYMRLMYTTLNETADKAAKAPIGVEKYATKTSNLSAFQTLYCLTQCTPDLSPQDCRKCLSLVIEDVAWCCTYRIGGRVLYPSCNFRYELYPFYRQQASVAPTLAPPALVNSTPSSEDKGKSGKSSGTVVATVVSITVAVLLFIVGVCFLSKRTRKEYDTVADGNSANDIATLDSLQYDFSTIEAATNKFSADNKLGEGGFGEVYRGMLPNGQEIAVKRLSQGSGQGGEEFKNEAMVVAKLQHRNLVRFLGFSLQGQEKILIYEYMQNKSLDYIIFDHEKQRQLNWRQRYEIIKGIVRGIQYLHEDSKFKIIHRDLKANNILLDSDMNPKISDFGIARIFSIDQTQGNTSRIIGTYGYVSPEYAMHGKFSVKSDVYSFGVLLMEIISGKKNSSFHQTDGAVDLLSHAWKLWKDETPLELLDPTLIESYTPNEVIRCIHIGLLCVQEDPTDRPTMASIALMLDSYSVTLPTPLQPEFFVPSYN 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1313 658 Gene3D Transferase(Phosphotransferase) domain 1 442 644 - -
Prci11g1313 658 FunFam cysteine-rich receptor-like protein kinase 10 442 644 - -
Prci11g1313 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Prci11g1313 658 Pfam Salt stress response/antifungal 176 267 IPR002902 -
Prci11g1313 658 Pfam Salt stress response/antifungal 48 151 IPR002902 -
Prci11g1313 658 SMART serkin_6 366 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1313 658 ProSiteProfiles Protein kinase domain profile. 366 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1313 658 ProSiteProfiles Gnk2-homologous domain profile. 42 153 IPR002902 -
Prci11g1313 658 Gene3D Phosphorylase Kinase; domain 1 328 441 - -
Prci11g1313 658 ProSitePatterns Protein kinases ATP-binding region signature. 372 394 IPR017441 GO:0005524
Prci11g1313 658 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 41 152 - -
Prci11g1313 658 CDD STKc_IRAK 372 638 - -
Prci11g1313 658 FunFam Cysteine-rich receptor-like protein kinase 10 328 441 - -
Prci11g1313 658 SUPERFAMILY Protein kinase-like (PK-like) 352 655 IPR011009 -
Prci11g1313 658 FunFam Cysteine-rich receptor-like protein kinase 25 161 269 - -
Prci11g1313 658 ProSiteProfiles Gnk2-homologous domain profile. 159 269 IPR002902 -
Prci11g1313 658 Gene3D - 162 269 IPR038408 -
Prci11g1313 658 Gene3D - 42 153 IPR038408 -
Prci11g1313 658 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 43 653 - -
Prci11g1313 658 Pfam Protein tyrosine and serine/threonine kinase 368 634 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1313 Prci-Chr11 11144185 11147692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1313 25 654 Receptor kinase-like Gene Family AT4G05200 50.861 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g1313 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1313 - - gmx:100305391 827.78