Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1312 ATGGCAGCTTCCAAAAACTACGCAATTTCTTCCCTCTTCGTCTTCCTATCGATCTTCACAAGCGAAGCTTCTTTCAATTACACGGCTCATTACTGCTCAAACGCCACCATCTTCCCCACCAACACCACTTTCAAACGAAACCTCAACGTCCTCCTCCACTCCCTCACCTCCAACGCCTCCCAGTTCGGAGGCTACTACATGACCATCATGGGCTTCGGAACCACCGACGCCGTCAACGGCCTCTTCCTCTGCCGCGGCGACATCATCTCCCCCGCCGCCTGCCAAGAGTGCGTCACCACGGCCGCCAAAGACATAACTATCCGTTGCCCTAATCGAACCGCGGCCATAATCTGGTCCGACCAGTGCATGCTGCGCTACACCAGCAAGTATTTCCGGTTCGACAGCGTCATCCCCGGGGTAAACCTCAACGACGGCAAGAGCTTCTCCGGTGGGAACTTGGAACAGTTCAACGACTCATTATTCAGCTTATTGAATGATTTGACAAGGAAGGCTGCGAAACCACTGACGGTGAAGAAGTTTGCAGTTGGCGAAGCGATATTATCATCAAGCTCGCCGGTGACGACGCTGTATGCTTTAGAGCAGTGCACGGATGACTTGAGCAGTGATCAGTGTGATACTTGTCTGCAAAAAGCCATTGGAATTTTGGGTAACTGTTGTGAGGGAAAACTAGGGGCAAGTGTTCTTCTTGCTTCGTGCAACATCAGATACGAACTGTACCCATTTTACAATGTAACGGCTGTATCACCTGGAACTGCAGTAAGGTTGTCTCCTCCTTCAGGAAAGAGGAAAACTGAATCGCGAACAATTGTTCTAATTGTTGTCCCAGTTTCAATTGCTGTTGTGATCTTCTGTTTTGGAGGGTTTTTCCTGCTGAACAGACGGAAGCATAGGACTGCAGTAATTAATGAATGTCTGGATGGTGGAGAAGAAATTTCCCATCTAGAGTCGTTGCAATTCTCTTTTGCTACAATTGAAGCTGCGACAAACCATTTTTCACAGCTTAACAAAATAGGCAAGGGTGGATTTGGGGAAGTTTACAAGGGTGTGCTTCCAGATAAACGAGAAATAGCTGTTAAGAAACTTTCAAGTAAATCCAAACAGGGTGTTGCGGAATTTAAGAATGAGATTTCTCTTATTGCCAAGCTTCAACATAGAAATCTGGTTGCCTTATTTGGATTTTGCTTGCAAGAAGAAGAGAAAATGCTTGTTTATGAATATGTGCCTAACAAGAGTCTTGATTACTTTTTATTCGATTCAGATCCAAAGCGAAGAATGTTGAATTGGTTTGAGCGTTTCAAGATCATAGGGGGTATTGCAAGAGGAATTTTATATCTACATGAGCATTCACGACTTAAAGTTATACATCGTGATCTCAAACCAAGTAATGTGCTGTTAGATGATAACATGAATCCAAAAATATCAGACTTTGGCTTAGCAAGAATCGTTGCTATAGATCAAGATCAAGGAAGTACCAATAGAATTGTTGGAACATATGGTTACATGTCTCCTGAATATGCAATGCATGGACAATTTTCAGAAAAATCAGATGTGTATGGTTTTGGAGTTATAATTCTAGAAATAATTAGTGCAAAAAGAAATGCCCGATCTCCCAAGTCAAAGATTTTTGAAGATCTTCCAAGTCAGGCATGGAGACAATGGAGGAATCATACCCCACTGGCAATTATGGACTCAAACCTAAAAGAATCATACTCTCACACTGAAGTCATAAAGTGCCTTCAAATTGGACTATTATGTGTCCAAGCAGACCCAGATGATAGACCTACAATGGCGACAGTTCTTTCATACCTTAGTACTCAATTAATTGATTTGCCATTTCCAAGAGAACCTGCGCTCTTAAGGTACAGTGCTGGGAAATCAACCAACATGGAAGATGGAGATTTCAGTTCAGGTCAATTCTCCAGTAATTCCACACCTTCTTCCATCAATGACATGTCCAAGAGTGCCTTTTTCCCTCGATAG 2001 0.4338 MAASKNYAISSLFVFLSIFTSEASFNYTAHYCSNATIFPTNTTFKRNLNVLLHSLTSNASQFGGYYMTIMGFGTTDAVNGLFLCRGDIISPAACQECVTTAAKDITIRCPNRTAAIIWSDQCMLRYTSKYFRFDSVIPGVNLNDGKSFSGGNLEQFNDSLFSLLNDLTRKAAKPLTVKKFAVGEAILSSSSPVTTLYALEQCTDDLSSDQCDTCLQKAIGILGNCCEGKLGASVLLASCNIRYELYPFYNVTAVSPGTAVRLSPPSGKRKTESRTIVLIVVPVSIAVVIFCFGGFFLLNRRKHRTAVINECLDGGEEISHLESLQFSFATIEAATNHFSQLNKIGKGGFGEVYKGVLPDKREIAVKKLSSKSKQGVAEFKNEISLIAKLQHRNLVALFGFCLQEEEKMLVYEYVPNKSLDYFLFDSDPKRRMLNWFERFKIIGGIARGILYLHEHSRLKVIHRDLKPSNVLLDDNMNPKISDFGLARIVAIDQDQGSTNRIVGTYGYMSPEYAMHGQFSEKSDVYGFGVIILEIISAKRNARSPKSKIFEDLPSQAWRQWRNHTPLAIMDSNLKESYSHTEVIKCLQIGLLCVQADPDDRPTMATVLSYLSTQLIDLPFPREPALLRYSAGKSTNMEDGDFSSGQFSSNSTPSSINDMSKSAFFPR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1312 666 FunFam Cysteine-rich receptor-like protein kinase 10 140 248 - -
Prci11g1312 666 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
Prci11g1312 666 Gene3D - 24 131 IPR038408 -
Prci11g1312 666 Gene3D - 142 248 IPR038408 -
Prci11g1312 666 ProSiteProfiles Gnk2-homologous domain profile. 26 131 IPR002902 -
Prci11g1312 666 MobiDBLite consensus disorder prediction 636 660 - -
Prci11g1312 666 ProSiteProfiles Gnk2-homologous domain profile. 136 248 IPR002902 -
Prci11g1312 666 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 300 413 - -
Prci11g1312 666 ProSiteProfiles Protein kinase domain profile. 338 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1312 666 CDD STKc_IRAK 344 610 - -
Prci11g1312 666 Pfam Salt stress response/antifungal 154 246 IPR002902 -
Prci11g1312 666 Pfam Salt stress response/antifungal 32 128 IPR002902 -
Prci11g1312 666 Gene3D Transferase(Phosphotransferase) domain 1 414 616 - -
Prci11g1312 666 SMART serkin_6 338 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1312 666 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 25 131 - -
Prci11g1312 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Prci11g1312 666 Gene3D Phosphorylase Kinase; domain 1 305 413 - -
Prci11g1312 666 SUPERFAMILY Protein kinase-like (PK-like) 321 611 IPR011009 -
Prci11g1312 666 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 20 660 - -
Prci11g1312 666 MobiDBLite consensus disorder prediction 636 666 - -
Prci11g1312 666 FunFam cysteine-rich receptor-like protein kinase 10 414 617 - -
Prci11g1312 666 Pfam Protein kinase domain 339 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1312 Prci-Chr11 11119922 11123228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1312 11 666 Receptor kinase-like Gene Family AT4G05200 44.262 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g1312 Pkinase 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1312 - - cam:101500396 744.577