Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1311 ATGTTTCTCTTCAAAATTCCTCCTCTTCTTCCCCTTTCTGCGTTGCTTGTCACATCCTTCCTAGCAACCCAAGCTCTGGCAGCTCCCGTTTACAATGGCCATTACTGCAACGACACCACCACGTACACACCCAATTCCACATTTCATCGTAATATTAATGTACTCCTCTCTTCTCTCACCTCCAACGCCTCCCTGGACTCCTCTGGCTCCTACAACACCGTCATGGGCTTCGGCACCCTCTACGCCGTCAACGGCTTCTTTCTCTGCCGCGGCGATATCACCATGCTCACTTGTCAAGACTGCGTTGCCGCCGCCGCCACAGACGTTATTTCCCGATGCCCTAACCAAACAGAGGCCGTCATCTGGTACGACGTCTGCACTCTTCGTTTCACCAACACGTTCTTCCGGTTTGGGAGCGTCTTTCCCGGAATGAATTTGACGGATGAGAAGAGCGTATCTAGCACTGATATTATCCGATTCAACCAGTCGTTGTTCGGATTGTTGGATGATTTGGACACGCGAGCTGCGAATTCGGAGACGGATAAGAAATTTGCGACGGGGGAAGTGAAGGTTACGAGCTCGATGACTGTGTATGGGCTTGTGCAATGCTCGAAGGAACTGACCTCCGAACAATGTGAGACGTGTTTGCAGAACGCCATCGGAATTCTTCCGTCATGCTGCGACGGAAAACAAGGCGCCAGGGTTCTGCTTTCGCCTTGTAATGTGAGATACGAGCTGTTCCAATTTTACAATTCAACCACTTCGTCACCTGGAAAGAAGTATGGATCAGGAACAGTTGCAATGATTGTTATCCTTGTTGTTGTTTGCGTAATCCTCTTATGTTTAGGCTGCTATTTCCTGCTGAGAAGATCAAGGAAGAGTCATAGGACTATTCTAAGAGAACATTTTGGAAATGAAAGTGGGGCTTTGGAGTCGTTGCAGTTTAGTTTGGCTACAGTTGAAGCAGCAACAAACAAGTTTTCACACCGGAATAAGATAGGCAAGGGTGGATTTGGAGAAGTTTACAAGGGTGTTCTTCCAGATGGACGAGGAATAGCCGTTAAAAAACTTTCTAAAAGTTCAGGTCAAGGTTTGATAGAATTCACGAATGAGATTTTACTCATAGCCAAGCTTCAACACAGGAATCTAGTGGCTTTGTTAGGATTTTGCTTGGAAGCAGAAGAGAAAATGCTTATCTATGAATATGTGCCCAACAAAAGCCTTGATTACTTTTTATTTGATTCTGAAAGGAGAAAACTACTGAATTGGGTTCAGCGTTACAGAATCTTGAAAGGAATTGCACGAGGAATTCTTTATTTACATGAGTACTCAAGACTCAAAGTTATACACCGTGATCTTAAACCTAGTAATGTGTTGTTGGATGATAATATGAATCCAAAAATTTCAGACTTTGGTTTGGCAAGAATAGTAGCTATAGATGATGATCAAGGAAAAACAAGAAGAATAGTTGGAACATATGGCTATATGTCTCCAGAATATGCAATGCATGGACAATTTTCTGAAAAGTCTGATGTATTCAGTTATGGGGTCATGACTCTGGAGGTCATAAGTGCAAAAAGAAATGCTTGGTCACTGGACTCACATAATGTTGATGACCTCATTAGTCATGCTTGGAGACAATGGAGGGATCAAACACCATTAGAAATACTGGACCCAGATCTAAAAGAAGCTTGCCCACATAACGAAGTCATGAGGTGCATTCAGATTGGTTTGTTATGCGTCCAAGAAAACCCAAATGATAGACCCATAATGGCAAACGTTGTTTCATATTTTGGTAATCCTTCAGCCGAATTGCCTCTACCTCGACAGCCAGCATTTTTGATGAACAAAGGAATAGCAGGGGAATCCAGTTCAGGCTCTAGATCTGTATACTCCGTAAATGATTTGTCTATCACTAATTCTTTCCCTCGGTAA 1935 0.4346 MFLFKIPPLLPLSALLVTSFLATQALAAPVYNGHYCNDTTTYTPNSTFHRNINVLLSSLTSNASLDSSGSYNTVMGFGTLYAVNGFFLCRGDITMLTCQDCVAAAATDVISRCPNQTEAVIWYDVCTLRFTNTFFRFGSVFPGMNLTDEKSVSSTDIIRFNQSLFGLLDDLDTRAANSETDKKFATGEVKVTSSMTVYGLVQCSKELTSEQCETCLQNAIGILPSCCDGKQGARVLLSPCNVRYELFQFYNSTTSSPGKKYGSGTVAMIVILVVVCVILLCLGCYFLLRRSRKSHRTILREHFGNESGALESLQFSLATVEAATNKFSHRNKIGKGGFGEVYKGVLPDGRGIAVKKLSKSSGQGLIEFTNEILLIAKLQHRNLVALLGFCLEAEEKMLIYEYVPNKSLDYFLFDSERRKLLNWVQRYRILKGIARGILYLHEYSRLKVIHRDLKPSNVLLDDNMNPKISDFGLARIVAIDDDQGKTRRIVGTYGYMSPEYAMHGQFSEKSDVFSYGVMTLEVISAKRNAWSLDSHNVDDLISHAWRQWRDQTPLEILDPDLKEACPHNEVMRCIQIGLLCVQENPNDRPIMANVVSYFGNPSAELPLPRQPAFLMNKGIAGESSSGSRSVYSVNDLSITNSFPR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1311 644 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
Prci11g1311 644 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 288 402 - -
Prci11g1311 644 ProSiteProfiles Gnk2-homologous domain profile. 30 135 IPR002902 -
Prci11g1311 644 CDD STKc_IRAK 333 598 - -
Prci11g1311 644 ProSiteProfiles Gnk2-homologous domain profile. 142 249 IPR002902 -
Prci11g1311 644 FunFam cysteine-rich receptor-like protein kinase 10 403 605 - -
Prci11g1311 644 SMART serkin_6 327 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1311 644 ProSiteProfiles Protein kinase domain profile. 327 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1311 644 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 35 640 - -
Prci11g1311 644 FunFam Cysteine-rich receptor-like protein kinase 10 143 249 - -
Prci11g1311 644 Gene3D Phosphorylase Kinase; domain 1 289 402 - -
Prci11g1311 644 Gene3D Transferase(Phosphotransferase) domain 1 403 604 - -
Prci11g1311 644 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 29 135 - -
Prci11g1311 644 Gene3D - 30 135 IPR038408 -
Prci11g1311 644 Gene3D - 145 249 IPR038408 -
Prci11g1311 644 Pfam Salt stress response/antifungal 36 132 IPR002902 -
Prci11g1311 644 Pfam Salt stress response/antifungal 155 245 IPR002902 -
Prci11g1311 644 SUPERFAMILY Protein kinase-like (PK-like) 312 616 IPR011009 -
Prci11g1311 644 Pfam Protein tyrosine and serine/threonine kinase 330 596 IPR001245 GO:0004672|GO:0006468
Prci11g1311 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1311 Prci-Chr11 11105322 11108852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1311 29 644 Receptor kinase-like Gene Family AT4G05200 45.942 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g1311 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1311 - - ccaj:109813299 787.334