Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1310 ATGGCTGTGGTTTCTCTTAGGATGCTTTCATTTCTCTATCTTCTTTCCATACTTGTATCTCAAGTCACGGCCCAGCCAGATTTCCTGTCTCATGAATGTAACAATGGAAATGGCAACTACACTGTTAATGGTGCCTACCAGGCCAACCTCAACACCCTTTTGTCCAATATTGCTTCTGACACACAGGTTGACTATGGTTTCTACAACTTCTCTCGGGGCCAAAACTCTGACAAAGTTAATGCAATAGGGTTGTGTAGAGGAGATGTTGCCCCGTATATTTGCCGCAGTTGCCTCAATGATTCTAGAATCCGTCTCACAGAGATGTGTCTAAATCAGATGGAAGCAATTGGATTCTATGACAATTGCATGTTGCGTTATTCAAACCGTTCAATATTTAACACCGACGAAACTTCACCTCACTTCTGTTTGTCATCCACTGCTAACGCAACAGATGTTGATGAGTTCAATCAGGTGTTGAGGAGTTTGCTGGATAGTTTAACTGGTAGGGCTTCATCGGGGAACTCTCTTCTTAAGTTTGCAACAGCAAATGTTGCGGGCCCAGACTTTCAGACTCTATTTGGTCTTGTCCAGTGTACACCTGATTTATCTCTGCAACAGTGCAGTGACTGCTTAGTTGGGCCAATCTCAGGACTCCCAGAATGTTCAAATGGCAAGATTGGTGGTAGAATTTTAAGACCAAGCTATAATTTTAGATATGAAAACTACCGCTTATACAACGAAACCAATGATTCAACACCACCATCAGAAGGCAAGAACAACACATCACGAACTATAATTGCCATAGTTGTTCCAATTGGTTCCGTTGTTGTCTTGCTCATCCTTGTCTGCATCTGTTTAAGAATGAGGAAGCCATGGAAATATATTAAAAAATTATTTTCAGACGATGGAGTTGAAGCTATCAGTGAAATTAGGTCATCTGAGACATTGCAATTGAAGTTTGACAGTATAATAGCCGCCACAAATAACTTTTCTGAGGAAAATAAGCTTGGACAAGGTGGATTTGGACCTGTTTACAAGGGTAAGCTTATTGATGGACAAGAAATTGCTGTGAAAAGGTTGTCTAGGAATTCTTCCCAAGGAGATGTAGAATTTAAGAATGAAGTTTTGTTAGTAGCCAAGCTTCAGCATCGAAATTTAGTTAGACTACTTGCCTTTTGTTTGGAAAGTCAAGAAAGACTATTAGTGTATGAGTTTATTCCCAATAAAAGTCTCGATTACTTCATATTTGATCCAATCAAGCGTGCAGAGTTATCTTGGGAAAAGCGATACAAAATCATAGGAGGCATTGCTAGAGGACTTCTTTACCTTCACAAAGATTCTCGCTTGCGAGTTATTCATCGTGATCTTAAAGCAAGTAACATTCTTTTAGATATAGAGATGAATGCAAAAATATCGGATTTTGGCATGGCAAGATTAGTTGGAAGGGACCAGACTCAAGATAATACTAGTAGAGTTGTAGGGACATTTGGATATATGGCACCTGAATATGTATTGCATGGACAATTCTCAGTAAAGACAGATGTTTTTAGTTTTGGAATACTAGTTTTAAAGATTGTGACTGGTCGTAAAAATAGTGAAGTTTTCCAAAGGGAGAATGCAGAGAATCTAGTCACCTTTGCATGGAGAAACTGGAGGGAAGGAACAGCCACAAGTATTATGGACCCTGCAATTACCGGAGGTTCGAGAGATGAAATAATGAGATGCATCCACATAGGGTTGCTCTGTGTTCAAGATGATGTAGCTGACAGACCACCCATGACTTCAGTTGAAGTCATGCTTAATAGCTACTCAGCCACTTTTCCATTGGCCTCTCAACCTGCTTCTTACATGAATAGTAGAAATTTTTCTTACAGCAGATCAGGAGATTATACTTCAGGGGATACAAGCATTAGAAAATGA 1920 0.3969 MAVVSLRMLSFLYLLSILVSQVTAQPDFLSHECNNGNGNYTVNGAYQANLNTLLSNIASDTQVDYGFYNFSRGQNSDKVNAIGLCRGDVAPYICRSCLNDSRIRLTEMCLNQMEAIGFYDNCMLRYSNRSIFNTDETSPHFCLSSTANATDVDEFNQVLRSLLDSLTGRASSGNSLLKFATANVAGPDFQTLFGLVQCTPDLSLQQCSDCLVGPISGLPECSNGKIGGRILRPSYNFRYENYRLYNETNDSTPPSEGKNNTSRTIIAIVVPIGSVVVLLILVCICLRMRKPWKYIKKLFSDDGVEAISEIRSSETLQLKFDSIIAATNNFSEENKLGQGGFGPVYKGKLIDGQEIAVKRLSRNSSQGDVEFKNEVLLVAKLQHRNLVRLLAFCLESQERLLVYEFIPNKSLDYFIFDPIKRAELSWEKRYKIIGGIARGLLYLHKDSRLRVIHRDLKASNILLDIEMNAKISDFGMARLVGRDQTQDNTSRVVGTFGYMAPEYVLHGQFSVKTDVFSFGILVLKIVTGRKNSEVFQRENAENLVTFAWRNWREGTATSIMDPAITGGSRDEIMRCIHIGLLCVQDDVADRPPMTSVEVMLNSYSATFPLASQPASYMNSRNFSYSRSGDYTSGDTSIRK 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1310 639 Gene3D - 25 130 IPR038408 -
Prci11g1310 639 Gene3D - 137 244 IPR038408 -
Prci11g1310 639 CDD STKc_IRAK 336 601 - -
Prci11g1310 639 FunFam cysteine-rich receptor-like protein kinase 10 406 607 - -
Prci11g1310 639 FunFam Cysteine-rich receptor-like protein kinase 10 139 244 - -
Prci11g1310 639 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Prci11g1310 639 SUPERFAMILY Protein kinase-like (PK-like) 314 600 IPR011009 -
Prci11g1310 639 ProSiteProfiles Gnk2-homologous domain profile. 137 244 IPR002902 -
Prci11g1310 639 FunFam Cysteine-rich receptor-like protein kinase 10 295 405 - -
Prci11g1310 639 Gene3D Transferase(Phosphotransferase) domain 1 406 613 - -
Prci11g1310 639 Gene3D Phosphorylase Kinase; domain 1 295 405 - -
Prci11g1310 639 SMART serkin_6 330 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1310 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Prci11g1310 639 Pfam Protein kinase domain 331 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1310 639 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 620 - -
Prci11g1310 639 Pfam Salt stress response/antifungal 142 242 IPR002902 -
Prci11g1310 639 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Prci11g1310 639 ProSiteProfiles Protein kinase domain profile. 330 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1310 639 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1310 Prci-Chr11 11087907 11091105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1310 26 619 Receptor kinase-like Gene Family AT4G21410 50.080 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g1310 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1310 - - lang:109353867 825.083