Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1293 ATGATGAGGTTCTTCACCTTCATCGCCCTTCTCCTTTTGCTAGTTCCTTCCAACGCTGCAATATCTTCTCAAATGGTCGAGACCCTCCCTGGCTTTCCTGGAAAACTTCCCTTCAAACTTGAAACTGGGTATGTTGGGGTTGGGGACTCGGACAGCGTTCAACTATTTTACTACTTTGTTGAATCGGAGAGGGATCCTGATGAAGATCCTCTCATCCTTTGGCTCACCGGTGGTCCTGGTTGTTCTGGTTTCTATGCCTTCGTCTATGAAGTTGGTCCCCTGTTATTTGATTATGCCAAATCTAGTAGCGGCAGAGTCAAAGTTCCGGTGCTGAAATTGAATCCATACTCATGGACTAAAGTATCTAACATTATCTTCATCGATGCCCCCGTTGGCACTGGGTTCTCCTATGCAACAAACTCGGAGGCATATGTAGTCGATGATATATTATCCGCTACACAAACCTCCGAATTTCTGAGGAAGTGGCTGTTATCTCATCCCCGGTTCCTGAAGAATCCTTTGTACATCAGTGGTGATTCATATTCAGGCATCATTGTCCCTATCCTTGTCAAGATGATATCTGATGATAATGATGCAGGTATTAAGCCACGAATGAATCTAAAGGGTTATTCGATAGGAAATCCAATAACGAATGAAGTTGTTGATGAGAACTGGAGAGTTCCATTTGCACAAAGATTAGGACTTCTACCAGATAAACTTTATGAGTCAACCAAACGAGATTGCCGTGGTAAATATGTAGATGTAGATCCAAGCAACGCTGCATGTTTAGGGGATCTTGAAGTTTATACGCAGTGCACTAATATGCTCAATACTGCAAACGTATTAGAACCTAATTGTGCTCGTGATTCGCCAAAACCAATGGGACGGGACCAATCAGCATTATCCAAGTGGGATCCTAATATCATCGAAGAGGATTCCTTGGAGCTTCTTTCCACCCTCTATAATTCTGAACCATGGTGTCGGCCATATAACTATGTCTTCTGTTATATTTGGGCTAATGACGAAAATGTTCAGAATGCCCTCCACGTTCGGAAGGGAACCAAGAAATGGTGGCCAAGATGCAATAACAGTTTAGCTTACACAGAGAGTGTGCCAAGTACTGTCCCATACCATAAGAACCTTACAAACAAAGCCTTTGCAGTTCTGATTTACAGTGGAGATCATGACATGGTTGCTCCATACGTGGGCACCTTAGCGTGGGTAAGGTCTCTGAACTTGACAGAAAGTAGCAAGTGGAGACCATGGTATGTCCAAGGACAAGTTGGAGGATACACAGTGGAGTATACACATAACAATAATTACAGCTTAACATACGCGACAGTGAAGGGAGCAGGTCATACAGCGCCAGAGTACAAACCTGAAGACTGCTATGCAATGTTTACAAGGTGGATTGCTCGTTTACCTCTCTGA 1431 0.4361 MMRFFTFIALLLLLVPSNAAISSQMVETLPGFPGKLPFKLETGYVGVGDSDSVQLFYYFVESERDPDEDPLILWLTGGPGCSGFYAFVYEVGPLLFDYAKSSSGRVKVPVLKLNPYSWTKVSNIIFIDAPVGTGFSYATNSEAYVVDDILSATQTSEFLRKWLLSHPRFLKNPLYISGDSYSGIIVPILVKMISDDNDAGIKPRMNLKGYSIGNPITNEVVDENWRVPFAQRLGLLPDKLYESTKRDCRGKYVDVDPSNAACLGDLEVYTQCTNMLNTANVLEPNCARDSPKPMGRDQSALSKWDPNIIEEDSLELLSTLYNSEPWCRPYNYVFCYIWANDENVQNALHVRKGTKKWWPRCNNSLAYTESVPSTVPYHKNLTNKAFAVLIYSGDHDMVAPYVGTLAWVRSLNLTESSKWRPWYVQGQVGGYTVEYTHNNNYSLTYATVKGAGHTAPEYKPEDCYAMFTRWIARLPL 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1293 476 FunFam Carboxypeptidase 374 473 - -
Prci11g1293 476 SUPERFAMILY alpha/beta-Hydrolases 26 475 IPR029058 -
Prci11g1293 476 Gene3D alpha/beta hydrolase 20 295 IPR029058 -
Prci11g1293 476 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 460 IPR001563 GO:0004185|GO:0006508
Prci11g1293 476 Pfam Serine carboxypeptidase 30 472 IPR001563 GO:0004185|GO:0006508
Prci11g1293 476 Gene3D - 327 475 - -
Prci11g1293 476 FunFam Serine carboxypeptidase-like 19 19 292 - -
Prci11g1293 476 ProSitePatterns Serine carboxypeptidases, histidine active site. 443 460 IPR033124 GO:0004185
Prci11g1293 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Prci11g1293 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Prci11g1293 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 443 456 IPR001563 GO:0004185|GO:0006508
Prci11g1293 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Prci11g1293 476 FunFam Carboxypeptidase 326 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1293 Prci-Chr11 10974530 10979996 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1293 338 476 Calmodulin-binding Proteins AT2G22960 48.921 9.72e-43 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1293 K16296 - cave:132177596 592.423