Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1292 ATGATGAGGTTCTTCACCTTCATCGCCCTTCTCCTTTTGCTAGTTCCTTCCAACGCTGCAATATCTTCTCAAATGGTCGAGACCCTCCCTGGCTTTCCTGGAAAACTTCCCTTCAAACTTGAAACTGGGTATGTTGGGGTTGGGGACTCGGACAGCGTTCAACTATTTTACTACTTTGTTGAATCGGAGAGGGATCCTGATGAAGATCCTCTCATCCTTTGGCTCACCGGTGGTCCTGGTTGTTCTGGTTTCTATGCCTTCGTCTATGAAGTTGGTCCCCTGTTATTTGATTATGCCAAATCTAGTAGCGGCAGAGTCAAAGTTCCGGTGCTGAAATTGAATCCATACTCATGGACTAAAGTATCTAACATTATCTTCATCGATGCCCCCGTTGGCACTGGGTTCTCCTATGCAACAAACTCGGAGGCATATGTAGTCGATGATATATTATCCGCTACACAAACCTCCGAATTTCTGAGGAAGTGGCTGTTATCTCATCCCCGGTTCCTGAAGAATCCTTTGTACATCAGTGGTGATTCATATTCAGGCATCATTGTCCCTATCCTTGTCAAGATGATATCTGATGATAATGATGCAGGTATTAAGCCACGAATGAATCTAAAGGGTTATTCGATAGGAAATCCAATAACGAATGAAGTTGTTGATGAGAACTGGAGAGTTCCATTTGCACAAAGATTAGGACTTCTACCAGATAAACTTTATGAGTCAACCAAACGAGATTGCCGTGGTAAATATGTAGATGTAGATCCAAGCAACGCTGCATGTTTAGGGGATCTTGAAGTTTATACGCAGAACCTAATTGTGCTCGTGATTCGCCAAAACCAATGGGACGGGACCAATCAGCATTATCCAAGTGGGATCCTAATATCATCGAAGAGGATTCCTTGGAGCTTCTTTCCACCCTCTATAATTCTGAACCATGGTGTCGGCCATATAACTATGTCTTCTGTTATATTTGGGCTAATGACGAAAATGTTCAGAATGCCCTCCACGTTCGGAAGATATCAGGGAACCAAGAAATGGTGGCCAAGATGCAATAACAGTTTAGCTTACACAGAGAGTGTGCCAAGTACTGTCCCATACCATAAGAACCTTACAAACAAAGCCTTTGCAGTTCTGATTTACAGTGGAGATCATGACATGGTTGCTCCATACGTGGGCACCTTAGCGTGGGTAAGGTCTCTGAACTTGACAGAAAGTAGCAAGTGGAGACCATGGTATGTCCAAGGACAAGTTGGAGGATACACAGTGGAGTATACACATAACAATAATTACAGCTTAACATACGCGACAGTGAAGGGAGCAGGTCATACAGCGCCAGAGTACAAACCTGAAGACTGCTATGCAATGTTTACAAGGTGGATTGCTCGTTTACCTCTCTGA 1404 0.4373 MMRFFTFIALLLLLVPSNAAISSQMVETLPGFPGKLPFKLETGYVGVGDSDSVQLFYYFVESERDPDEDPLILWLTGGPGCSGFYAFVYEVGPLLFDYAKSSSGRVKVPVLKLNPYSWTKVSNIIFIDAPVGTGFSYATNSEAYVVDDILSATQTSEFLRKWLLSHPRFLKNPLYISGDSYSGIIVPILVKMISDDNDAGIKPRMNLKGYSIGNPITNEVVDENWRVPFAQRLGLLPDKLYESTKRDCRGKYVDVDPSNAACLGDLEVYTQNLIVLVIRQNQWDGTNQHYPSGILISSKRIPWSFFPPSIILNHGVGHITMSSVIFGLMTKMFRMPSTFGRYQGTKKWWPRCNNSLAYTESVPSTVPYHKNLTNKAFAVLIYSGDHDMVAPYVGTLAWVRSLNLTESSKWRPWYVQGQVGGYTVEYTHNNNYSLTYATVKGAGHTAPEYKPEDCYAMFTRWIARLPL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1292 467 SUPERFAMILY alpha/beta-Hydrolases 26 466 IPR029058 -
Prci11g1292 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 451 IPR001563 GO:0004185|GO:0006508
Prci11g1292 467 FunFam Carboxypeptidase 365 464 - -
Prci11g1292 467 Gene3D alpha/beta hydrolase 20 289 IPR029058 -
Prci11g1292 467 Gene3D - 337 466 - -
Prci11g1292 467 FunFam Carboxypeptidase 337 467 - -
Prci11g1292 467 FunFam Serine carboxypeptidase-like 19 19 281 - -
Prci11g1292 467 Pfam Serine carboxypeptidase 30 463 IPR001563 GO:0004185|GO:0006508
Prci11g1292 467 ProSitePatterns Serine carboxypeptidases, histidine active site. 434 451 IPR033124 GO:0004185
Prci11g1292 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Prci11g1292 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 434 447 IPR001563 GO:0004185|GO:0006508
Prci11g1292 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Prci11g1292 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1292 Prci-Chr11 10974530 10979996 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1292 343 467 Calmodulin-binding Proteins AT2G22960 46.400 1.26e-34 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1292 K16296 - qsu:111997404 496.508