LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci11g1290	ATGATGAGGTTCTTCACCTTCATCGCCCTTCTCCTTTTGCTAGTTCCTTCCAACGCTGCAATATCTTCTCAAATGGTCGAGACCCTCCCTGGCTTTCCTGGAAAACTTCCCTTCAAACTTGAAACTGGGTATGTTGGGGTTGGGGACTCGGACAGCGTTCAACTATTTTACTACTTTGTTGAATCGGAGAGGGATCCTGATGAAGATCCTCTCATCCTTTGGCTCACCGGTGGTCCTGGTTGTTCTGGTTTCTATGCCTTCGTCTATGAAGTTGGTCCCCTGTTATTTGATTATGCCAAATCTAGTAGCGGCAGAGTCAAAGTTCCGGTGCTGAAATTGAATCCATACTCATGGACTAAAGTATCTAACATTATCTTCATCGATGCCCCCGTTGGCACTGGGTTCTCCTATGCAACAAACTCGGAGGCATATGTAGTCGATGATATATTATCCGCTACACAAACCTCCGAATTTCTGAGGAAGTGGCTGTTATCTCATCCCCGGTTCCTGAAGAATCCTTTGTACATCAGTGGTGATTCATATTCAGGCATCATTGTCCCTATCCTTGTCAAGATGATATCTGATGATAATGATGCAGGTATTAAGCCACGAATGAATCTAAAGGGTTATTCGATAGGAAATCCAATAACGAATGAAGTTGTTGATGAGAACTGGAGAGTTCCATTTGCACAAAGATTAGGACTTCTACCAGATAAACTTTATGAGTCAACCAAACGAGATTGCCGTGGTAAATATGTAGATGTAGATCCAAGCAACGCTGCATGTTTAGGGGATCTTGAAGTTTATACGCAGAACCTAATTGTGCTCGTGATTCGCCAAAACCAATGGGACGGGACCAATCAGCATTATCCAAGTGGGATCCTAATATCATCGAAGAGGATTCCTTGGAGCTTCTTTCCACCCTCTATAATTCTGAACCATGGTGTCGGTGGAGATCATGACATGGTTGCTCCATACGTGGGCACCTTAGCGTGGGTAAGGTCTCTGAACTTGACAGAAAGTAGCAAGTGGAGACCATGGTATGTCCAAGGACAAGTTGGAGGATACACAGTGGAGTATACACATAACAATAATTACAGCTTAACATACGCGACAGTGAAGGGAGCAGGTCATACAGCGCCAGAGTACAAACCTGAAGACTGCTATGCAATGTTTACAAGGTGGATTGCTCGTTTACCTCTCTGA	1206	0.442	MMRFFTFIALLLLLVPSNAAISSQMVETLPGFPGKLPFKLETGYVGVGDSDSVQLFYYFVESERDPDEDPLILWLTGGPGCSGFYAFVYEVGPLLFDYAKSSSGRVKVPVLKLNPYSWTKVSNIIFIDAPVGTGFSYATNSEAYVVDDILSATQTSEFLRKWLLSHPRFLKNPLYISGDSYSGIIVPILVKMISDDNDAGIKPRMNLKGYSIGNPITNEVVDENWRVPFAQRLGLLPDKLYESTKRDCRGKYVDVDPSNAACLGDLEVYTQNLIVLVIRQNQWDGTNQHYPSGILISSKRIPWSFFPPSIILNHGVGGDHDMVAPYVGTLAWVRSLNLTESSKWRPWYVQGQVGGYTVEYTHNNNYSLTYATVKGAGHTAPEYKPEDCYAMFTRWIARLPL	401

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci11g1290	401	ProSitePatterns	Serine carboxypeptidases, histidine active site.	368	385	IPR033124	GO:0004185
	Prci11g1290	401	Gene3D	alpha/beta hydrolase	20	289	IPR029058	-
	Prci11g1290	401	PRINTS	Carboxypeptidase C serine protease (S10) family signature	368	381	IPR001563	GO:0004185\|GO:0006508
	Prci11g1290	401	PRINTS	Carboxypeptidase C serine protease (S10) family signature	127	137	IPR001563	GO:0004185\|GO:0006508
	Prci11g1290	401	PRINTS	Carboxypeptidase C serine protease (S10) family signature	114	126	IPR001563	GO:0004185\|GO:0006508
	Prci11g1290	401	PRINTS	Carboxypeptidase C serine protease (S10) family signature	162	187	IPR001563	GO:0004185\|GO:0006508
	Prci11g1290	401	FunFam	Serine carboxypeptidase-like 19	19	281	-	-
	Prci11g1290	401	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	25	385	IPR001563	GO:0004185\|GO:0006508
	Prci11g1290	401	Pfam	Serine carboxypeptidase	30	273	IPR001563	GO:0004185\|GO:0006508
	Prci11g1290	401	Pfam	Serine carboxypeptidase	318	397	IPR001563	GO:0004185\|GO:0006508
	Prci11g1290	401	SUPERFAMILY	alpha/beta-Hydrolases	26	400	IPR029058	-
	Prci11g1290	401	Gene3D	-	310	397	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci11g1290	Prci-Chr11	10974530	10979996	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci11g1290	318	401	Calmodulin-binding Proteins	AT2G22960	51.190	6.19e-23	93.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci11g1290	K16296		-	zju:112491666	407.912