Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1281 ATGTCTCGCTCGCCGGCCGACGCTTTTGCTGCCGGTGACTTGCTATGCGGTGAGGATGCCGGTGAAGTGATCTCCGGCGAAAACCACCCGACGTCGTCGTACCTGCCGTCGTATTCTCCTCCTTCCGACGATGCGACCATCGGCGGACTCATCGACGTCGAGGCGCATCACATGCCTGACCCGGATTACCTACGGCGGTGCCGTCATCGTTTAATCGACGTAACCGCTCGCCAGGACGCCATCAACTGGATCTTGAAGGTTCACGCACATTATGAGTTTCGTCCGGTAACGGCGTTCCTCTCGGTCAACTACCTCGATCGTTTTCTGTCTTGCTCTGCACTTCCGCGACAAAGTCAATGGGAGTATCATCTGCTATCAGTGGCATGCTTGTCTTTAGCGGCGAAACTGGAGGAACCTGTGGTGCCTCTATTACTGGACCTCCAATTAGTGGATCCCAGATTCGTATTCGAACCCAAGACGATTCAAAGAATGGAGCTCTATGTCATGACCAAGCTACGCTGGAGATTACGCTCCATAACACCCTTCGACTATCTCCATTACTTCATCTCTAAGGTCTCTTCTTTCTCGGACGACCCGAAACCCGAATCCATAACCCGGATCTTCTCGACTGCTTCCAGCCTCATCCTCAGCACCACCCTTGTTATTGATTTCTTGGGTTTTCCGCCATCGGCCATAGCGGTCGCCGCCGTTCTCTGTTCAGCTGGCCAGGGCCAATCGCCACCGTGCTTCCATGATGGAGTAAACAAAGAAACGGTGAGAAGCTGTCACCAACTAATGGAGGATTACGTGGTGGACACGTGTCCCTTTGCTGGCTATAAAGGCCCTGGAGCCGACCCGGAGCCGCCTTCGAGTCCAGTAGGCGTGTTGGAAGGCGCTAGTTCATGCAGCGGCTGCGAAACTCGCTCTGAGAACCCAGCGTCAACCAGCGAAGCCGAGCCGCCCAACAAGGGGGCACGATCTCCTGATGTCAATGGGGAATAG 1002 0.5489 MSRSPADAFAAGDLLCGEDAGEVISGENHPTSSYLPSYSPPSDDATIGGLIDVEAHHMPDPDYLRRCRHRLIDVTARQDAINWILKVHAHYEFRPVTAFLSVNYLDRFLSCSALPRQSQWEYHLLSVACLSLAAKLEEPVVPLLLDLQLVDPRFVFEPKTIQRMELYVMTKLRWRLRSITPFDYLHYFISKVSSFSDDPKPESITRIFSTASSLILSTTLVIDFLGFPPSAIAVAAVLCSAGQGQSPPCFHDGVNKETVRSCHQLMEDYVVDTCPFAGYKGPGADPEPPSSPVGVLEGASSCSGCETRSENPASTSEAEPPNKGARSPDVNGE 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1281 333 ProSitePatterns Cyclins signature. 77 108 IPR006671 -
Prci11g1281 333 Gene3D - 50 247 - -
Prci11g1281 333 SUPERFAMILY Cyclin-like 47 176 IPR036915 -
Prci11g1281 333 PANTHER CYCLINS 53 270 IPR039361 -
Prci11g1281 333 CDD CYCLIN_AtCycD-like_rpt2 179 266 - -
Prci11g1281 333 Pfam Cyclin, N-terminal domain 51 176 IPR006671 -
Prci11g1281 333 SMART cyclin_7 82 170 IPR013763 -
Prci11g1281 333 FunFam D2/4-type cyclin 60 177 - -
Prci11g1281 333 Gene3D - 60 177 - -
Prci11g1281 333 SMART Cyclin_C_2 179 290 IPR004367 -
Prci11g1281 333 Pfam Cyclin, C-terminal domain 179 270 IPR004367 -
Prci11g1281 333 MobiDBLite consensus disorder prediction 302 321 - -
Prci11g1281 333 MobiDBLite consensus disorder prediction 281 333 - -
Prci11g1281 333 CDD CYCLIN_AtCycD-like_rpt1 76 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1281 Prci-Chr11 10908488 10911445 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1281 13 273 Core Cell Cycle Gene Families AT1G70210 43.911 9.88e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1281 K18810 - jre:109009685 376.326