Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1280 ATGTCTCGCTCGCCGGCCGACGCTTTTGCTGCCGGTGACTTGCTATGCGGTGAGGATGCCGGTGAAGTGATCTCCGGCGAAAACCACCCGACGTCGTCGTACCTGCCGTCGTATTCTCCTCCTTCCGACGATGCGACCATCGGCGGACTCATCGACGTCGAGGCGCATCACATGCCTGACCCGGATTACCTACGGCGGTGCCGTCATCGTTTAATCGACGTAACCGCTCGCCAGGACGCCATCAACTGGATCTTGAAGGTTCACGCACATTATGAGTTTCGTCCGGTAACGGCGTTCCTCTCGGTCAACTACCTCGATCGTTTTCTGTCTTGCTCTGCACTTCCGCGACAAAGTCAATGGGAGTATCATCTGCTATCAGTGGCATGCTTGTCTTTAGCGGCGAAACTGGAGGAACCTGTGGTGCCTCTATTACTGGACCTCCAATTAGTGGATCCCAGATTCGTATTCGAACCCAAGACGATTCAAAGAATGGAGCTCTATGTCATGACCAAGCTACGCTGGAGATTACGCTCCATAACACCCTTCGACTATCTCCATTACTTCATCTCTAAGGTCTCTTCTTTCTCGGACGACCCGAAACCCGAATCCATAACCCGGATCTTCTCGACTGCTTCCAGCCTCATCCTCAGCACCACCCTTGTTATTGATTTCTTGGGTTTTCCGCCATCGGCCATAGCGGTCGCCGCCGTTCTCTGTTCAGCTGGCCAGGGCCAATCGCCACCGTGCTTCCATGATGGAGAAACGGTGAGAAGCTGTCACCAACTAATGGAGGATTACGTGGTGGACACGTGTCCCTTTGCTGGCTATAAAGGCCCTGGAGCCGACCCGGAGCCGCCTTCGAGTCCAGTAGGCGTGTTGGAAGGCGCTAGTTCATGCAGCGGCTGCGAAACTCGCTCTGAGAACCCAGCGTCAACCAGCGAAGCCGAGCCGCCCAACAAGGGGGCACGATCTCCTGATGTCAATGGGGAATAG 993 0.5519 MSRSPADAFAAGDLLCGEDAGEVISGENHPTSSYLPSYSPPSDDATIGGLIDVEAHHMPDPDYLRRCRHRLIDVTARQDAINWILKVHAHYEFRPVTAFLSVNYLDRFLSCSALPRQSQWEYHLLSVACLSLAAKLEEPVVPLLLDLQLVDPRFVFEPKTIQRMELYVMTKLRWRLRSITPFDYLHYFISKVSSFSDDPKPESITRIFSTASSLILSTTLVIDFLGFPPSAIAVAAVLCSAGQGQSPPCFHDGETVRSCHQLMEDYVVDTCPFAGYKGPGADPEPPSSPVGVLEGASSCSGCETRSENPASTSEAEPPNKGARSPDVNGE 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1280 330 ProSitePatterns Cyclins signature. 77 108 IPR006671 -
Prci11g1280 330 MobiDBLite consensus disorder prediction 299 318 - -
Prci11g1280 330 Pfam Cyclin, C-terminal domain 179 246 IPR004367 -
Prci11g1280 330 SUPERFAMILY Cyclin-like 47 176 IPR036915 -
Prci11g1280 330 Gene3D - 60 177 - -
Prci11g1280 330 SMART Cyclin_C_2 179 287 IPR004367 -
Prci11g1280 330 SMART cyclin_7 82 170 IPR013763 -
Prci11g1280 330 Gene3D - 50 242 - -
Prci11g1280 330 CDD CYCLIN_AtCycD-like_rpt2 179 263 - -
Prci11g1280 330 Pfam Cyclin, N-terminal domain 51 176 IPR006671 -
Prci11g1280 330 FunFam D2/4-type cyclin 60 177 - -
Prci11g1280 330 PANTHER CYCLINS 53 267 IPR039361 -
Prci11g1280 330 CDD CYCLIN_AtCycD-like_rpt1 76 174 - -
Prci11g1280 330 MobiDBLite consensus disorder prediction 279 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1280 Prci-Chr11 10908484 10911447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1280 13 270 Core Cell Cycle Gene Families AT1G70210 43.542 1.41e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1280 K18810 - jre:109009685 365.155