Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1246 ATGAGCTGCAACGGTTGTCGTGTGCTTAGAAAAGGTTGTGGGGAGGACTGCATGCTCCGAGATTGCCTTTGGGGCATCGATAGCCCGCAAGCCCAAGCCCACGCCACCGTCTTCGTCGCTAAATTCTTCGGCCGCGCTGCCCTCATGTCCTTCGTCTCCGCCGTACCCTCCCCCCAGAGATCCGCTTTGTTTCGGTCACTTTTGTACGAAGCAGTGGGACGTACCATAAATCCAGTGAACGGTGCGGTGGGCCTGCTCTGGACCGGGAACTGGCACCTCTGCCAATCAGGAGTCCAGAGAGTGCTATGCGGTGGCGCCTTGGGGCCACTCCCCGACGTCTCCGGTGGATCTTCGGTGCCAACTGCGGCGGACGACGACGGACACGTTCTATACTTTTCTCGGCAGCGACGAGGCGATATGGGATCGGGATCAAGGAACCTCAATAGAAAGGTCCCCAGTTACGACTTGGTGTTGGAGAACAATATCCAAGCACGTGATCGTGTTGATCGGTACTGCTCACGGTCGCCGGAGAGAGTGGTGGTGGTCGGCGGCAGCAGAAGGAGTTACGAAGCAAAGGAAGATGGGAGAGCGGCGACGCCGTCAGAGGGATCGGAAACGTCAACGTTAGGAAGCAGCGCTGCGCAGTGCGGCGCGGAAAGGAAGCTCCTAATGCTTTTCTCCTAA 684 0.5819 MSCNGCRVLRKGCGEDCMLRDCLWGIDSPQAQAHATVFVAKFFGRAALMSFVSAVPSPQRSALFRSLLYEAVGRTINPVNGAVGLLWTGNWHLCQSGVQRVLCGGALGPLPDVSGGSSVPTAADDDGHVLYFSRQRRGDMGSGSRNLNRKVPSYDLVLENNIQARDRVDRYCSRSPERVVVVGGSRRSYEAKEDGRAATPSEGSETSTLGSSAAQCGAERKLLMLFS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1246 227 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Prci11g1246 227 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 201 - -
Prci11g1246 227 MobiDBLite consensus disorder prediction 185 213 - -
Prci11g1246 227 Pfam Lateral organ boundaries (LOB) domain 2 99 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1246 Prci-Chr11 10754158 10755218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1246 1 147 AS2 family AT3G49940 59.868 5.87e-59 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci11g1246 LOB 6.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1246 - - pcin:129284755 437.958