Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1234 ATGCTTCGTTTGTGTTACAGGCCGCTGGAGCGTTGCTTTGGATGGCGAGGATCCGGCGGCGATGGCCTTTTGTGGCATTCCGACTTGAAGCCTCATGCCTCTGGCCACTTCTCCATCGCCGTTGCTCAGGCCAATAACAGTCTCGAAGATCAGGGCCAAGTCTTCACGTCTCCCTCCGCCACCTATATCGGCGTCTATGATGGCCATGGCGGACCCGAGGCTTCCAGATTCGTCAACAAACGCCTCTTCCCTCATTTGCAGAAGTTTGCTTCTGAACAAGGAGGATTGTCCGTGGATGTGATCAAAAAGGCGTTTAAGGCCACTGAAGACGAGTTTTTGCATTTGGTGAAGCGAACGTTGCCTATAAGTCCCCAAATTGCTTCTGTAGGATCATGCTGTCTTCTCGGTGCAATTTCTGATAATATACTGTATGTTGCAAACCTTGGAGACTCTAGAGCTGTTCTTGGCCGCCGAGATTCAGAGGGCAAAAAATGCCCAGTGGTGGCAGAGCGGCTATCAACGGATCATAATGTGGCTGTTGAGGAGGTGAGGAGGGAGGTGGAAGCCCTCCATCCTGATGATTCACACATTGTGGTTTATAGCCGTGGAGTTTGGAGGATTAAAGGCATTATACAGGTGTCAAGATCAATTGGTGATGTGTATCTTAAGAGACCTGACTTTTATAGAGACCCAGTTTTTCAGCAATTTGGAAACCCAGTTCCTTTGAAGCGTCCAGTAATGACAGCTGAACCATCAATCCTTATTAGGGAGCTCGAGCCGGAAGATTTATTCTTGATATTTGCATCAGATGGGCTTTGGGAACAATTAAGTGATCAAGCAGCAGTTGAGATTGTCTTTAAGCATCCAAGAGCTGGAATCGCCAAGAGATTGGTGAGAGCTGCTCTGCAGGAAGCTGCAAAGAAGAGAGAGATGAGATATGATGATATAAAGAAACTCGAGAAGGGAATAAGAAGACATTTTCATGACGATATCACTGTTATCGTTATATATCTTGATCACCAGAAAGGTACCCCTTATGATAGAACTAAACCGAATGCTGTTGGCTGCACTAGTGCCCCCGTGGATATTTTCTCCCTCAATGCTGATGAATCAGAACAGAGCATGCTCGCTTCCGTTGCTTAA 1143 0.4689 MLRLCYRPLERCFGWRGSGGDGLLWHSDLKPHASGHFSIAVAQANNSLEDQGQVFTSPSATYIGVYDGHGGPEASRFVNKRLFPHLQKFASEQGGLSVDVIKKAFKATEDEFLHLVKRTLPISPQIASVGSCCLLGAISDNILYVANLGDSRAVLGRRDSEGKKCPVVAERLSTDHNVAVEEVRREVEALHPDDSHIVVYSRGVWRIKGIIQVSRSIGDVYLKRPDFYRDPVFQQFGNPVPLKRPVMTAEPSILIRELEPEDLFLIFASDGLWEQLSDQAAVEIVFKHPRAGIAKRLVRAALQEAAKKREMRYDDIKKLEKGIRRHFHDDITVIVIYLDHQKGTPYDRTKPNAVGCTSAPVDIFSLNADESEQSMLASVA 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1234 380 PANTHER PROTEIN PHOSPHATASE 34 337 IPR015655 GO:0004722|GO:0006470
Prci11g1234 380 ProSitePatterns PPM-type phosphatase domain signature. 62 70 IPR000222 GO:0043169
Prci11g1234 380 SMART PP2C_SIG_2 38 338 IPR001932 -
Prci11g1234 380 SUPERFAMILY PP2C-like 42 340 IPR036457 -
Prci11g1234 380 Gene3D - 27 345 IPR036457 -
Prci11g1234 380 FunFam Probable protein phosphatase 2C 42 27 345 - -
Prci11g1234 380 CDD PP2Cc 35 338 IPR001932 -
Prci11g1234 380 ProSiteProfiles PPM-type phosphatase domain profile. 33 338 IPR001932 -
Prci11g1234 380 SMART PP2C_4 26 336 IPR001932 -
Prci11g1234 380 Pfam Protein phosphatase 2C 57 307 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1234 Prci-Chr11 10683431 10686296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1234 21 339 PP2C-type Phosphatase Gene Family AT3G51370 59.327 1.11e-145 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1234 K01102 - rcu:8272244 637.876