Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1229 ATGGATGCTTCATCAGAGAAAATGAGTGGTGAAATGAGAAAGCTAATATGCCATAACCAAAACACCTCAGAATCACTACATACATCTGATCCTGGAACTTACCATTTTGGATCCTCAGGAAAAAACAATGAGACTGATTCTGAATTTTTGGACAAAAAACTTAGCACTGAGGAAGCCAACTCTTCTGTTGATGAAAAATCACCTAAGGTTTCTGATGGTATGGCTGAAAATTTGGCCATTCAACTGCCTGCAGAACCTCATTGTGATTTAGGCAACAGTTGTCAGAATGGGGAAGGTACATGCTTTCAGCATAATACCTTAGAGCAGGCCAATGCAATCGGCATGGAGGTTCCCTCCTATCAAATGAGTAGTGAAACCAGGGAGCTAAGATGCCATAATAACAATACCTCAGACCAGCTGCATACACTTGATCTGGGAAATACACTTTCTGAATTGTCAGAAAAAACTAATCAGATTGGCTCTGAATCTTTGGATAATGAACAGAGGGTTCTTGGCACAAGGCAAACCACCTCTCTTCTTCATGAAAAATCACCTTCAGATGGCATGACTGGGACTTCTGTTATTCAAGTTCCTGTACAACCTCAATGTGACTTAGACAAGAGCTGTCAAACTGAAGAAGGTTCAAGTTTTCAACTTAATACTTTAGAACTGGGCAAGATTATTGGCATGGATGCTTCCTCAGATCACTTGAGTAGCAAAACTGCAAGGTCAACGTGCCATATCCATAATACCTCAGAAAAGTTGCAGACATTTGATCCCAGAACTGCTCATTTTGAAATGTCAGAGAAAACTAATCAGACAGGCTCTGAATTTTTGAACAATGAACAAAAGGTCCTAGGTACTGGGGAAACTAGCTCTCTTCTTGATGGAAAACAACTTAAAGTTTCTGACAGTATGACTGGAGATTCTGTTATTCAATTGCCAGCAGAATCTCAATGTGACTTAGACAATGTTAGCCAGAATGGAGGAGGTTCATGCTTTCAATATGATACCTTAAAACAGGTTTCTGGTTCTTTATCTAATGATGAATTCCAGAACAAACACCAGCAGGCCTCCCAAAGTGTTCATAATGAGCCTGTGGAAAGAAGTGGTGGAAATGAACAATTAGATCCACCTTCTCAAGATACTGCCAAGGTAAGTAGCCCTAACTTTTTGCAAAGAAACTCCAGAAGGGCAACTCATGCCCGGGTAGGGCGCAAGGATAAAAGAACTGCAACATCATTGAAGAAAAAATATATGCTAAGGAGTAGTGATAGAGTTTTGCGGTCAAGGATGCGTGAAAAACCTAAACCACCCACATCAAACACTAATCTGGTTAATGTGGATCATGTTGGAGAAAATAGAAGAAAAGGCAAGAAGAAGAAGAAGAAGGGTAGAGGAAGGAGAGTGACTGATGAGTTTTCAAGAATCAGAGCTCGTCTAAGATATTTTTTAAGTCAAGTGCGCTATAAGCAGAGCTTGATTGATGCTTATTCTGGTGAGGGCTGGAAAGGATACAGCTTGGAAAAATTAAAGCCCGAGAAGGAGCTTCAATGTGCTAAGTCTAAAATACTTGGGTTTAAATTGAAAATCAGGGATTTGTTTCGACATTTGGATACATTGTGTGCTGAAGGGAGGCTTCCACAATCCTTGTTTGATTCCAAAGGAGAGATTTGTAGTGAGGATATATTTTGTGCAAAATGCATGTCCAAAGACTTGACCACTGGTAATGATATAATACTTTGTGACGGTGTTTGTGATCGTGGATTTCACCAGTTCTGTTTGGAACCTCCATTATTATCTGAAAATATTCCACCTGATGATGAGGGTTGGCTATGCCCGGGATGTGATTGCAAAGATGACTGTTTTGATCTCCTTAATGATCTCTTAGGAACAAGCCTCTCTATTTATGATTCCTGGGAGAGGGTTTTTCCAGAGGCAGCTGCAGTTGCTGGAAATAAAGTGGATGGCAACTTGGGACTTCCATCAGATGATTCCGATGATGATGATTATAATCCTGATGTCACAGCAGATGAGGAGGTTGAAGGAGGCAAGTCAAGTTCTGATGAGTCTGAGAATGCTTCTGCTTCTGAGAAAATGGAGGCTCCACACAGTGGGAATCCATACTTAGGCCTTCCTTCTGATGATTCAGAGGACAACGATTATGATCCTAGTGCTGTCGATCATGACAAAGATGCAGCTGAAGAAAGTTCAGGTTCTGATTTCACGTCTGATTCTGAGGACCTTGCTGATGTAGTCAAGGGTAACACAATATCTGGACAGGATAATCATCCCGTACCTGCATCATCTTTGCAAGAGCTAGATCCTGGTGAAGAAGATTCTACTCCTGTTTCTGGGAAAAGACATATTGAAAGGTTGGACTACAAAAAACTGTATGATGAGACCTACCAAAATGCTTCATCTGATACTAGTGATGATGAAGATTGGACAGCTAGTCCTGCTTTAAGTAGGAAAAAGAAAGTCACCAGCGAAGGGCTGGCAGTGTCACCAAATGGGAAAGCCTCAATACTGGATCATATACAGAAAGGGACTGAAAGTACTCCTAGGAGAAACAATCGTCAAACTGAAGTTGAAAGTATGGATAATTCACCCAATAAATCACTTGCAGGCTCTAAGAGGGCTGGTTCAAATGGTAAAAAACGAGGATCTTCAACTTACAGAAGACTTGGGGAAGATGCAGTTAAGGTACTTTACAAAAACTTTCGAGAAAATCAGTACCCGGACCGCACCACAAAAGAAAGCATGGCACAGGAACTTGGACTTACTTTCAACCAGGTTAGAAAATGGTTTGAGAATGCTCGTTGGAGCTTTCGGAATTCTCCACGTATGGAAGCCAGGGCGAGTGAAAGTGCTTCACAGGGTGCCACTTCCAGCAGAGTTGAAAATGAGATAGTACTTGGTGATGAGAAGAGGAACTCAAAATCAGGGTCCCAGGAGGGTAATATACAGAAATCAAAATCCCAAAGCTCTAGGAAGAGGAAGCATAAGACAGTTACTGTGGAATCTGATGCAAATACAAACATTGATAGTGCGGCAACAAATCCGCTTGTCCACTCATCTAGAGTTGGTGAAGTGCAAAGAAGTCGCAAAATGAAAACAAGGAAGGGAAAATGA 3135 0.4124 MDASSEKMSGEMRKLICHNQNTSESLHTSDPGTYHFGSSGKNNETDSEFLDKKLSTEEANSSVDEKSPKVSDGMAENLAIQLPAEPHCDLGNSCQNGEGTCFQHNTLEQANAIGMEVPSYQMSSETRELRCHNNNTSDQLHTLDLGNTLSELSEKTNQIGSESLDNEQRVLGTRQTTSLLHEKSPSDGMTGTSVIQVPVQPQCDLDKSCQTEEGSSFQLNTLELGKIIGMDASSDHLSSKTARSTCHIHNTSEKLQTFDPRTAHFEMSEKTNQTGSEFLNNEQKVLGTGETSSLLDGKQLKVSDSMTGDSVIQLPAESQCDLDNVSQNGGGSCFQYDTLKQVSGSLSNDEFQNKHQQASQSVHNEPVERSGGNEQLDPPSQDTAKVSSPNFLQRNSRRATHARVGRKDKRTATSLKKKYMLRSSDRVLRSRMREKPKPPTSNTNLVNVDHVGENRRKGKKKKKKGRGRRVTDEFSRIRARLRYFLSQVRYKQSLIDAYSGEGWKGYSLEKLKPEKELQCAKSKILGFKLKIRDLFRHLDTLCAEGRLPQSLFDSKGEICSEDIFCAKCMSKDLTTGNDIILCDGVCDRGFHQFCLEPPLLSENIPPDDEGWLCPGCDCKDDCFDLLNDLLGTSLSIYDSWERVFPEAAAVAGNKVDGNLGLPSDDSDDDDYNPDVTADEEVEGGKSSSDESENASASEKMEAPHSGNPYLGLPSDDSEDNDYDPSAVDHDKDAAEESSGSDFTSDSEDLADVVKGNTISGQDNHPVPASSLQELDPGEEDSTPVSGKRHIERLDYKKLYDETYQNASSDTSDDEDWTASPALSRKKKVTSEGLAVSPNGKASILDHIQKGTESTPRRNNRQTEVESMDNSPNKSLAGSKRAGSNGKKRGSSTYRRLGEDAVKVLYKNFRENQYPDRTTKESMAQELGLTFNQVRKWFENARWSFRNSPRMEARASESASQGATSSRVENEIVLGDEKRNSKSGSQEGNIQKSKSQSSRKRKHKTVTVESDANTNIDSAATNPLVHSSRVGEVQRSRKMKTRKGK 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1229 1044 MobiDBLite consensus disorder prediction 45 71 - -
Prci11g1229 1044 SMART HOX_1 890 951 IPR001356 GO:0003677
Prci11g1229 1044 MobiDBLite consensus disorder prediction 801 817 - -
Prci11g1229 1044 ProSiteProfiles 'Homeobox' domain profile. 887 947 IPR001356 GO:0003677
Prci11g1229 1044 ProSitePatterns Zinc finger PHD-type signature. 565 616 IPR019786 -
Prci11g1229 1044 MobiDBLite consensus disorder prediction 950 967 - -
Prci11g1229 1044 SUPERFAMILY FYVE/PHD zinc finger 554 622 IPR011011 -
Prci11g1229 1044 MobiDBLite consensus disorder prediction 864 890 - -
Prci11g1229 1044 ProSiteProfiles Zinc finger PHD-type profile. 562 619 IPR019787 -
Prci11g1229 1044 MobiDBLite consensus disorder prediction 724 738 - -
Prci11g1229 1044 MobiDBLite consensus disorder prediction 780 799 - -
Prci11g1229 1044 MobiDBLite consensus disorder prediction 1 72 - -
Prci11g1229 1044 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 558 621 IPR013083 -
Prci11g1229 1044 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 357 1027 - -
Prci11g1229 1044 MobiDBLite consensus disorder prediction 662 677 - -
Prci11g1229 1044 MobiDBLite consensus disorder prediction 1008 1028 - -
Prci11g1229 1044 MobiDBLite consensus disorder prediction 399 413 - -
Prci11g1229 1044 Pfam PHD-finger 564 619 IPR019787 -
Prci11g1229 1044 SUPERFAMILY Homeodomain-like 886 949 IPR009057 -
Prci11g1229 1044 CDD PHD_PRHA_like 564 616 IPR045876 -
Prci11g1229 1044 MobiDBLite consensus disorder prediction 678 697 - -
Prci11g1229 1044 MobiDBLite consensus disorder prediction 347 471 - -
Prci11g1229 1044 Pfam Homeodomain 895 942 IPR001356 GO:0003677
Prci11g1229 1044 MobiDBLite consensus disorder prediction 654 896 - -
Prci11g1229 1044 MobiDBLite consensus disorder prediction 15 44 - -
Prci11g1229 1044 FunFam pathogenesis-related homeodomain protein-like 556 616 - -
Prci11g1229 1044 MobiDBLite consensus disorder prediction 347 397 - -
Prci11g1229 1044 SMART PHD_3 564 617 IPR001965 -
Prci11g1229 1044 CDD homeodomain 894 947 IPR001356 GO:0003677
Prci11g1229 1044 MobiDBLite consensus disorder prediction 947 1044 - -
Prci11g1229 1044 Gene3D - 890 960 - -
Prci11g1229 1044 MobiDBLite consensus disorder prediction 419 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1229 Prci-Chr11 10637269 10644700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1229 362 1003 Homeobox Transcription Factor Family AT3G19510 41.534 1.06e-131 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Prci11g1229 PHD 3.9e-10 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1229 - - pcin:129285574 2056.95