Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1226 ATGATCATCCAGGGAGATGAAAGAACTTTCATAACAACCAAGGAACAAGCAAGTGAAAATGAAGATCCTGAAGAGTGGTTAAAGCTGAATCTGAGCTTAGGAGGCTCAACTTCTCCAGTCTCTGCAGCAGGAGACCCAGATTCTCAATCATCAAGAGCAGCAGCTACTAAAGTTTTCTCCTGCAACTTCTGCATGAGGAAGTTCTTTAGTTCACAAGCATTAGGGGGTCATCAGAACGCACACAAAAGGGAAAGAGGAGCAGTAAGAAGATACCAGTCTCAGAAGTTGATGATGACGATGAGATCTTCCATCAACTCACCATTTCATCGAACGCTTGGTGTGCAGCCCCATTCACTTGTACACAAGACTTCATCAAGCCGGGGTGGAACTCCAATAATGGCATCGAGCTTTCAAGAACTTGCAATGGCATGGGCCTCACCTTTCATGGGGGAGGATCAAAAGGATCTGGTGTGGCCAGGAAGCTTTCGCATGGATCCACCAGAGCAAGCCGAGGCGCCACAAGAATCGCTCAAGCTTGATTTAGACCTGAGACTCTGA 558 0.4695 MIIQGDERTFITTKEQASENEDPEEWLKLNLSLGGSTSPVSAAGDPDSQSSRAAATKVFSCNFCMRKFFSSQALGGHQNAHKRERGAVRRYQSQKLMMTMRSSINSPFHRTLGVQPHSLVHKTSSSRGGTPIMASSFQELAMAWASPFMGEDQKDLVWPGSFRMDPPEQAEAPQESLKLDLDLRL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1226 185 PANTHER ZINC FINGER PROTEIN 4-LIKE 7 185 - -
Prci11g1226 185 ProSitePatterns Zinc finger C2H2 type domain signature. 61 81 IPR013087 -
Prci11g1226 185 SUPERFAMILY beta-beta-alpha zinc fingers 56 85 IPR036236 -
Prci11g1226 185 ProSiteProfiles Zinc finger C2H2 type domain profile. 59 86 IPR013087 -
Prci11g1226 185 Gene3D Classic Zinc Finger 47 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1226 Prci-Chr11 10632897 10633797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1226 16 173 C2H2 Transcription Factor Family AT1G24625 38.323 2.40e-21 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1226 - - gmx:100811125 191.045