Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1215 ATGTCTCGCCTTCTCTCTGCCACCCCCTCATCCTCTCTCACTCTCCGCTTGTCCTCTCCCATCACTCCCTTCTCTCTTTTCCTCTCTCTGCTCCGTTGCGGATTCCTGATTATGGAGGACGACCACCACCACCACCAACACTTCCATGGGGACCACCTTCTGTCCCCCGCCCCTTCTTTCTCTCAGCTTCTTCTTGCTGATCACCATGTGGACCCCTCTCTCCACTCTTCGTCCCTTTTCTCTGTTGCCAATGGCAACACCCCCACAATGCTCTGCTTCCAAACCTATCCAAATAATCCACCCGACCTCTTCCTTTCTGATCCCAAACCTGTCACCCCACACAAGTCTGTCATCACTTCCAGCGAATCCTCCTCTGCTTCTTCCTCCTGCAACCACGAGTCTCAAAAAAAACGAAGCGGGTCGGGACAGGAACTGGCGGGATGTACGGATTCCGTCGTGACAGCAGCTGGTGGTGGTGGCCGGAGACAGTCTAAGAAGGCCAGAGCGGAGAACCCCGCTTCAACAGGACATGCAAAGAGGAAGGAGAAACTCGGGGAACGAATCGCAGCGTTACAACAGCTCGTTTCTCCATTTGGGAAGACAGATACAGCGTCTGTGCTTCACGAGGCAATGGGATACATAAGGTTTCTCCACGACCAAGTTCAGGTCCTCTGCTCGCCTTACTTGCAGGGACTTCCTTCTTCGCCTCATTTGGTTCACGCCCATCCTGTGCGTCCCATCCCTTATCATCATCATTATCAGGGGGTTGGATTTGAGATCAACGCGAGAGATCGAGAAGCCAGAGGAGAGCTAAGTAGCAGAGGGCTGTGTCTGATCCCCGTGGAATCCACCGTACACGTGGCAAGGAGCAACGGTGCTGATTTCTGGTCACCTGCGATGGGGAATCATAATGTTTCGCCACCAACATGA 930 0.5366 MSRLLSATPSSSLTLRLSSPITPFSLFLSLLRCGFLIMEDDHHHHQHFHGDHLLSPAPSFSQLLLADHHVDPSLHSSSLFSVANGNTPTMLCFQTYPNNPPDLFLSDPKPVTPHKSVITSSESSSASSSCNHESQKKRSGSGQELAGCTDSVVTAAGGGGRRQSKKARAENPASTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQGLPSSPHLVHAHPVRPIPYHHHYQGVGFEINARDREARGELSSRGLCLIPVESTVHVARSNGADFWSPAMGNHNVSPPT 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1215 309 Gene3D - 162 230 IPR036638 GO:0046983
Prci11g1215 309 FunFam Transcription factor bHLH113 161 231 - -
Prci11g1215 309 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 179 229 IPR036638 GO:0046983
Prci11g1215 309 CDD bHLH_AtbHLH_like 179 224 IPR045239 -
Prci11g1215 309 MobiDBLite consensus disorder prediction 113 148 - -
Prci11g1215 309 MobiDBLite consensus disorder prediction 163 183 - -
Prci11g1215 309 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 168 217 IPR011598 GO:0046983
Prci11g1215 309 MobiDBLite consensus disorder prediction 104 183 - -
Prci11g1215 309 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 57 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1215 Prci-Chr11 10606132 10609244 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1215 179 299 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 47.541 2.20e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1215 - - pcin:129287021 582.022