Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1199 ATGGCAATCCTCCACCATCACAATGACCAACTAGCTCACCACGAGAACTCTTCCTCCTTCCTTGATGCTCTTTACTGTGACGAAGAAAAGTGGGAGGAGGAGGAGGATGAAATAGAACAAGTGGAAGGGAATGATGAGGCTGGTCTTCCTCTTCCTCGGATCTTGTTGGACCAAGACTTGTTCTGGGAAGACGAAGAGCTCGACTCTCTCTTCGCCAGGGAAGAAGAAGCTTGCTTTGACCTGAGCGTCGATCTCTCTCTGGCTCGTCGCGAGTCAGTGGAATGGATGCTTAAGGTCAAAGCCCATTATGGCTTCTCTGCTCTAACGGCAACACTGGCCATCCACTATCTGGACAGGTTCCTCTCGAGCTTCCATTTTCAAAGGGAGAAGCCGTGGATGATCCAGCTAGTGGCTGTCACTTGCCTCTCTCTCGCAGCAAAAGTTGAAGAAACTCAAGTCCCTCTTCTTCTAGATTTCCAAGTGGAAGATACTAAATACATGTTCGAGGCAAAGACTATACAGAGAATGGAGCTGCTTGTTCTATCAACGCTCAAATGGAAGATGCACCCAGTAACCCCTCTCTCGTTTCTTGATCACATCATAAGGAGGCTCGGCTTGAAAACCCATCTTCACTGGGAGTTCCTTAGGCGCTGCGAGCATCTCCTACTCTCTATACTTCCGGATTCAAGATTTGTGGGTTATCTCCCTTCGATATTGGCTACCGCGACAATGCTGCACGTGGTAGACCAGATTGAGCAGAGTGAAGGAGTTGAATATAAAAATCAGCTTCTGGGCATTCTTAAAAGCAACAAGGAGAAAGTGGATGAGTGCAATAATGCGATACAGGAGCTGTCAAGCCGTAACAATTATTATTATAACTACGGGCATAACAAGACGAAGAAGCGGAGGTACGGGGAAATGAGTCCCGGGAGCCCAAGTGGCGTAATCGACGCAGTTTTTGGGTCTGATGGTTCCAACGATTCGTGGGCGGTGGGGTCATCATTATGTTCATCCCCGGAGCCACTGTTCAAGAAGACCAGACCCCAAGAACAACAACAAATGACATTGTCACCGTTCAATCGGGTCACTGTCGGAATCATTGGCGCATCTCCTTGA 1116 0.483 MAILHHHNDQLAHHENSSSFLDALYCDEEKWEEEEDEIEQVEGNDEAGLPLPRILLDQDLFWEDEELDSLFAREEEACFDLSVDLSLARRESVEWMLKVKAHYGFSALTATLAIHYLDRFLSSFHFQREKPWMIQLVAVTCLSLAAKVEETQVPLLLDFQVEDTKYMFEAKTIQRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKTHLHWEFLRRCEHLLLSILPDSRFVGYLPSILATATMLHVVDQIEQSEGVEYKNQLLGILKSNKEKVDECNNAIQELSSRNNYYYNYGHNKTKKRRYGEMSPGSPSGVIDAVFGSDGSNDSWAVGSSLCSSPEPLFKKTRPQEQQQMTLSPFNRVTVGIIGASP 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1199 371 PANTHER CYCLINS 67 290 IPR039361 -
Prci11g1199 371 Gene3D - 88 189 - -
Prci11g1199 371 Pfam Cyclin, N-terminal domain 88 188 IPR006671 -
Prci11g1199 371 FunFam CYCLIN D32 190 279 - -
Prci11g1199 371 ProSitePatterns Cyclins signature. 89 120 IPR006671 -
Prci11g1199 371 Coils Coil 267 287 - -
Prci11g1199 371 Gene3D - 190 279 - -
Prci11g1199 371 SMART Cyclin_C_2 191 313 IPR004367 -
Prci11g1199 371 CDD CYCLIN_AtCycD-like_rpt2 191 277 - -
Prci11g1199 371 FunFam D3-type cyclin 82 189 - -
Prci11g1199 371 Pfam Cyclin, C-terminal domain 191 308 IPR004367 -
Prci11g1199 371 SMART cyclin_7 94 182 IPR013763 -
Prci11g1199 371 SUPERFAMILY Cyclin-like 192 253 IPR036915 -
Prci11g1199 371 SUPERFAMILY Cyclin-like 61 189 IPR036915 -
Prci11g1199 371 CDD CYCLIN_AtCycD-like_rpt1 88 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1199 Prci-Chr11 10452000 10453985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1199 12 323 Core Cell Cycle Gene Families AT4G34160 56.604 3.52e-117 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1199 K14505 - gmx:547740 509.99