Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1197 ATGGATAACATCACTCTATGTGTTCTATTGTTGATATTTGCTAGTGCTTTCCTGCCTCATTCTTCACATTCGCATGAGCTGACCAGGTCGAAAAGAGAAGCTTTAGAGATTATCATTGGCGGCGGCGGCGGCGATACTGGAAATGCTCCTTCGTCTTCCCCAGAATGTGGAGAATGTCAAAGTCCTCCGCCTTCTCCTCCACCTTCATGCTCACCTCCTCCTCCACCGCCGCCATGCCCACCTCCGCCCTCTCCTCCCCCACCGCCGCCTCCGCCTCCTCCCCCTCCACCCCCGCCGCCTCCCCCTCCCCCACCGCCGCCTCCCCCACCACCGCAACCCAGGCTGAAACGAGCAAAAAAAGTGCTTCTAAAATTCAAGCAGAACATCTGCGATCCGCAGGGCCGAACGTCAAACTGGAAGATGTCCAACGACGTATGTAAATTCAATGGCATCCGTTGCGCCACATATCCGAACGAAAAACAGAAGGCAGTGGCGGGACTGGACTTTAATGGCTACGCATTCTCCGCGGTGCAGAAGGATAAACCGCTTGACCTTTTCGGAATCTTGGCCCCGATCCCAGAGTTAGCATTCTTCCATGTGAACTCCAACAATTTCAGCGGCCAAGTCCCACCTCAAATCTCCCAGTTCCCATACTTCTTCGAGCTCGACCTCAGCAACAACAAGATAAGCGGTGAGTTTCCGAAAGAGGTCCTTCTATCGAAACAACTTGTGTTCCTGGATCTCAGGTTCAACGAACTTTGCGGTTCGATTCCACCGCAGCTCTTTAAGCTGCAACTAGACGTCATCTTCATCAACAACAACCAGCTCACCGGATGCCTTCCCGATGACTTCGGGTCCACGCCGGCCAGGTATCTTACATTCGCCAACAACAAGTTAACGGGTCCGATCCCCAAGAGTATTGGTAAAGCCACGAACATCACGGAGGTGCTGTTCCTGGGGAATCAGTTTTCTGGATGTTTACCTTATGAGATTGGGTTCCTCGTCAAAGCTACGGTTTTCGACGTGAGCAAGAACTGGCTGACCGGTCCAATCCCGCACTCCTTTGCCTGCTTGGATAACATCCAGTTCTTGAATTTGGCTGATAATCAGTTCTACGGGCCCGTTCCGGAGTCGGTGTGCAAGCTTTCAGGGCTCCGAAACGGGAATTTGACGCTGTCGGGTAATTATTTTACCCAGGTGGGACCAGAATGCAGGAAGCTGATAGACGCGAAGGTGCTGGACGTGCGGCGGAATTGCATTCTAGGACTTCGCGATCAGAGAACACAGGCTGAGTGCACCAAGTTCTTCTCCGAGGTCAAGCCGTGTCCGAACCCCAGGACTTTGCACATCGTACCTTGTAACAAGTACTATGAGAGCTACGAGAAGACGGTGCCGGGACCGGCGGCAGCAGGTTCACCGCCGACTCCGGTGACCTACAAGTCACTCAAACCGCATCGCTTGTGA 1464 0.5328 MDNITLCVLLLIFASAFLPHSSHSHELTRSKREALEIIIGGGGGDTGNAPSSSPECGECQSPPPSPPPSCSPPPPPPPCPPPPSPPPPPPPPPPPPPPPPPPPPPPPPPPPQPRLKRAKKVLLKFKQNICDPQGRTSNWKMSNDVCKFNGIRCATYPNEKQKAVAGLDFNGYAFSAVQKDKPLDLFGILAPIPELAFFHVNSNNFSGQVPPQISQFPYFFELDLSNNKISGEFPKEVLLSKQLVFLDLRFNELCGSIPPQLFKLQLDVIFINNNQLTGCLPDDFGSTPARYLTFANNKLTGPIPKSIGKATNITEVLFLGNQFSGCLPYEIGFLVKATVFDVSKNWLTGPIPHSFACLDNIQFLNLADNQFYGPVPESVCKLSGLRNGNLTLSGNYFTQVGPECRKLIDAKVLDVRRNCILGLRDQRTQAECTKFFSEVKPCPNPRTLHIVPCNKYYESYEKTVPGPAAAGSPPTPVTYKSLKPHRL 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1197 487 SUPERFAMILY L domain-like 119 422 - -
Prci11g1197 487 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 281 375 - -
Prci11g1197 487 MobiDBLite consensus disorder prediction 464 487 - -
Prci11g1197 487 Gene3D Ribonuclease Inhibitor 288 454 IPR032675 -
Prci11g1197 487 Pfam Leucine rich repeat N-terminal domain 118 153 IPR013210 -
Prci11g1197 487 Gene3D Ribonuclease Inhibitor 116 287 IPR032675 -
Prci11g1197 487 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 110 467 - -
Prci11g1197 487 MobiDBLite consensus disorder prediction 39 95 - -
Prci11g1197 487 MobiDBLite consensus disorder prediction 57 95 - -
Prci11g1197 487 PRINTS Proline rich extensin signature 65 77 - -
Prci11g1197 487 PRINTS Proline rich extensin signature 78 99 - -
Prci11g1197 487 PRINTS Proline rich extensin signature 100 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1197 Prci-Chr11 10437535 10439401 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1197 112 438 Leucine-rich Repeat extension Gene Families AT3G24480 41.641 1.61e-73 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1197 - - gmx:100781083 493.426