Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1188 ATGGCGGATCAAAATCAAACCGAAGCTGGAAGGCACCAGGAGGTTGGCCACAAGAGCCTTTTGCAGAGTGATGCTCTCTACCAGTACATTCTAGAGACCAGTGTCTACCCCAGAGAACCTGAACCCATGAAGGAGCTCAGAGAGATCACAGCCAAACACCCTTGGAACATCATGACAACCTCGGCAGACGAGGGGCAGTTCTTGAACATGCTCCTTAAGCTTGTCAATGCTAAGAACACCATGGAGATCGGTGTCTACACTGGCTACTCCCTTCTTGCCACTGCTCTGGCTCTTCCCGAGGACGGAAAGATACTGGCCATGGACATTAACAGAGAAAACTACGAACTGGGCCTTCCGGTAATTCAGAAAGCCGGTGTAGCCCACAAAATCGATTTCAGAGAGGGCCCTGCTCTTCCTGTTCTTGACGAGCTCGTTAAAGATGAAAAGAATCATGGGAGCTTTGATTTCATATTCGTGGATGCGGACAAGGACAACTATTTGAAATATCACAAGAGGCTGATCGACTTGGTAAAGGTAGGAGGACTGATCGGGTACGACAATACCTTGTGGAATGGGTCCGTGGTGGCACCACCCGATGCGCCTCTGAGGAAGTACGTGAGGTATTACAGAGACTTCGTGTTGGAGCTCAACAAGGCTTTGGCTGTGGACCCTAGGATCGAGATCTGCATGCTTCCCGTTGGTGATGGCATCACTCTCTGCCGTCGGATCAGCTGA 735 0.5048 MADQNQTEAGRHQEVGHKSLLQSDALYQYILETSVYPREPEPMKELREITAKHPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDELVKDEKNHGSFDFIFVDADKDNYLKYHKRLIDLVKVGGLIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITLCRRIS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1188 244 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 23 242 IPR029063 -
Prci11g1188 244 PANTHER O-METHYLTRANSFERASE-RELATED 17 243 - -
Prci11g1188 244 Gene3D Vaccinia Virus protein VP39 18 244 IPR029063 -
Prci11g1188 244 FunFam Caffeoyl-CoA O-methyltransferase 1 12 244 - -
Prci11g1188 244 Pfam O-methyltransferase 32 243 IPR002935 GO:0008171
Prci11g1188 244 CDD AdoMet_MTases 82 183 - -
Prci11g1188 244 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 19 243 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1188 Prci-Chr11 10308744 10310275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1188 3 244 Monolignol Biosynthesis Gene Families AT4G34050 90.496 2.20e-170 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1188 K00588 - gmx:100811247 469.159