Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1185 ATGTTCGGCAAGCTCGCGTTTTATTTTGAATTGCTAGCATTTCTGGGAATGCAGCTTCCCCTAACAATGGCAGATTGTCCTTTGGATTTTACTGGTTCAAACTTTACACTCGCATCCTCTATGTGCTCTAACCAGTTTGAAAGAGGGAAATGTTGCCGCTACATTAATGCTAACATTGCAGTTTCTGTTGCTCGTTTTGCAAATGTAACAAGAAGCCTTGGAGTCACCCTAAATGCTTCTGACCCCTGTCTCCAGACCATATCTCAGACCTTGCAACATTATGGCGTTCCACATAATGCAACAATTTTCTGTGGTTTTGGCACAAAAATCTCAGTTAATTATGAGTGTGAGGGTCGAACTACTGTCATGCAAATGCTGCAGTCTCCCCGATTTGTGCAGGTTGTGGAAAATTGTAAAGTGCCACTGGCTGAGGAAAGTAAATGCAAGAAATGCTTAAATGCTGGCATTAATTTCATACATCATCTGATAGGCATTAAAGATAATATAACACTGAGTACATGCCGTGATGCCACCTTTGCAGCATTGGCAAGCCAAGTTGATGAAATGTCTACCATTGACATTGCAAGCTGTTTCTTTAGGGTTCAAGGGCTTCTCAAACCTCGTGGTCCTTCATCTATGTTTCGGAAATTCAACTACAGGGAGATAAAGAAGGCAACGGAGGATTTCAACACCATCATTGGGCAAGGGGGGTTTGGAACAGTATATAAAGCTCATTTCCGTGATGATCTAGTGTTAGCAGTAAAGAGAATGAACAAAGTTTCAGAGCAAGGGGAGGATGAATTTTGTAAAGAAATAGAGCTTCTTGCTCGGTTACATCATAGGCATCTTGTTGCATTACGAGGTTTTTGCGTTAAAAATCATGAGAGGTTTTTGATGTATGAGTACATGGAAAATGGAAGCTTGAAAGATCATCTTCATTCCCCTAGTAAAGCACCTCTAAGTTGGCGAACGAGAATCCAAGTTGCCATTGATGTGGCTAATGCACTGGAGTATCTCCATTTCTATTGTGATCCTCCTTTATGGCACAGAGACATAAAATCTAGCAACATTTTATTGGATGAGAATTTTGTTGCTAAGTTAGCTGATTTCGGTCTTGCACATGCTTCAAAAAATGGCTCCATAAGCTTCGAAGCTGTAAACACCAATATCATGGGAACTCCAGGTTATATGGATCCTGAATATGTGGTTACTCATGAGCTGACTGAGAAAAGTGATATTTACAACTATGGAGTATTACTGCTAGAAATTGTGACCGGAAGACGAGCAATTCAAGATAATAAAAATTTGGTTGAATGGGCACAACCATACATGGGACCAGATTCTGTAACTCGATTGATGGAGCTAGTGGATCCTAATGTGAGGGAGTCATTTGACTTGGATCAGCTCCAGACAGCAGTGTCTATAGTAGAATGGTGCACACAGAGAGAGGGCAGGATCAGGCCTTCAATAAAACAAGTTCTTAGGCTTCTGTATGATACTTCAGAACCTATGCACAGTGGGTTTCTTCAAGATATTGAAGGTGAGGAGTGTGAAGGGAATCAGCAGAGTGGCAGAAGCAGCAGAGGTAAAATGCACAGAAATGAAGCATTATTTCAGAGCAAGGATGGAAGATATCTTGCTTCTTCTTCAAGTACATCCAGGTCTTACTGCAGCAAAAGCTTTTTACTTGAGACAAGTTCCCCACAGTCTCCTCTGAATATATTATCTGTCGAAGACAAATATCATTAG 1749 0.4094 MFGKLAFYFELLAFLGMQLPLTMADCPLDFTGSNFTLASSMCSNQFERGKCCRYINANIAVSVARFANVTRSLGVTLNASDPCLQTISQTLQHYGVPHNATIFCGFGTKISVNYECEGRTTVMQMLQSPRFVQVVENCKVPLAEESKCKKCLNAGINFIHHLIGIKDNITLSTCRDATFAALASQVDEMSTIDIASCFFRVQGLLKPRGPSSMFRKFNYREIKKATEDFNTIIGQGGFGTVYKAHFRDDLVLAVKRMNKVSEQGEDEFCKEIELLARLHHRHLVALRGFCVKNHERFLMYEYMENGSLKDHLHSPSKAPLSWRTRIQVAIDVANALEYLHFYCDPPLWHRDIKSSNILLDENFVAKLADFGLAHASKNGSISFEAVNTNIMGTPGYMDPEYVVTHELTEKSDIYNYGVLLLEIVTGRRAIQDNKNLVEWAQPYMGPDSVTRLMELVDPNVRESFDLDQLQTAVSIVEWCTQREGRIRPSIKQVLRLLYDTSEPMHSGFLQDIEGEECEGNQQSGRSSRGKMHRNEALFQSKDGRYLASSSSTSRSYCSKSFLLETSSPQSPLNILSVEDKYH 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1185 582 FunFam Putative receptor-like protein kinase 196 302 - -
Prci11g1185 582 Pfam SPARK 24 168 IPR043891 -
Prci11g1185 582 Gene3D Phosphorylase Kinase; domain 1 204 302 - -
Prci11g1185 582 ProSiteProfiles Protein kinase domain profile. 227 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1185 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 347 359 IPR008271 GO:0004672|GO:0006468
Prci11g1185 582 Gene3D Transferase(Phosphotransferase) domain 1 303 511 - -
Prci11g1185 582 SMART serkin_6 227 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1185 582 ProSitePatterns Protein kinases ATP-binding region signature. 233 255 IPR017441 GO:0005524
Prci11g1185 582 CDD STKc_IRAK 233 497 - -
Prci11g1185 582 FunFam Putative receptor-like protein kinase 303 505 - -
Prci11g1185 582 PANTHER OS01G0750732 PROTEIN 196 521 - -
Prci11g1185 582 SUPERFAMILY Protein kinase-like (PK-like) 208 498 IPR011009 -
Prci11g1185 582 Pfam Protein kinase domain 231 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1185 Prci-Chr11 10264785 10270332 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1185 194 576 Receptor kinase-like Gene Family AT3G19300 65.296 1.85e-171 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Prci11g1185 Pkinase 5.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1185 - - ahf:112715638 615.535