Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1184 ATGTTCGGCAAGCTCGCGTTTTATTTTGAATTGCTAGCATTTCTGGGAATGCAGCTTCCCCTAACAATGGCAGATTGTCCTTTGGATTTTACTGGTTCAAACTTTACACTCGCATCCTCTATGTGCTCTAACCAGTTTGAAAGAGGGAAATGTTGCCGCTACATTAATGCTAACATTGCAGTTTCTGTTGCTCGTTTTGCAAATGTAACAAGAAGCCTTGGAGTCACCCTAAATGCTTCTGACCCCTGTCTCCAGACCATATCTCAGACCTTGCAACATTATGGCGTTCCACATAATGCAACAATTTTCTGTGGTTTTGGCACAAAAATCTCAGTTAATTATGAGTGTGAGGGTCGAACTACTGTCATGCAAATGCTGCAGTCTCCCCGATTTGTGCAGGTTGTGGAAAATTGTAAAGTGCCACTGGCTGAGGAAAGTAAATGCAAGAAATGCTTAAATGCTGGCATTAATTTCATACATCATCTGATAGGCATTAAAGATAATATAACACTGAGTACATGCCGTGATGCCACCTTTGCAGCATTGGCAAGCCAAGTTGATGAAATGTCTACCATTGACATTGCAAGCTGTTTCTTTAGGGTTCAAGGGCTTCTCAAACCTCGTGCTATTGCTGCTATCATGCTCTTGGTCTTGGTTGTTCTAATTCGTCAGAAAAGAAAAGAACTAGTGGGGACTGATAATTTTAATAAAACACCTTCTAGTGCAATGTGGAAATTTCAGGAAGGTCCTTCATCTATGTTTCGGAAATTCAACTACAGGGAGATAAAGAAGGCAACGGAGGATTTCAACACCATCATTGGGCAAGGGGGGTTTGGAACAGTATATAAAGCTCATTTCCGTGATGATCTAGTGTTAGCAGTAAAGAGAATGAACAAAGTTTCAGAGCAAGGGGAGGATGAATTTTGTAAAGAAATAGAGCTTCTTGCTCGGTTACATCATAGGCATCTTGTTGCATTACGAGGTTTTTGCGTTAAAAATCATGAGAGGTTTTTGATGTATGAGTACATGGAAAATGGAAGCTTGAAAGATCATCTTCATTCCCCTAGTAAAGCACCTCTAAGTTGGCGAACGAGAATCCAAGTTGCCATTGATGTGGCTAATGCACTGGAGTATCTCCATTTCTATTGTGATCCTCCTTTATGGCACAGAGACATAAAATCTAGCAACATTTTATTGGATGAGAATTTTGTTGCTAAGTTAGCTGATTTCGGTCTTGCACATGCTTCAAAAAATGGCTCCATAAGCTTCGAAGCTGTAAACACCAATATCATGGGAACTCCAGGTTATATGGATCCTGAATATGTGGTTACTCATGAGCTGACTGAGAAAAGTGATATTTACAACTATGGAGTATTACTGCTAGAAATTGTGACCGGAAGACGAGCAATTCAAGATAATAAAAATTTGGTTGAATGGGCACAACCATACATGGGACCAGATTCTGTAACTCGATTGATGGAGCTAGTGGATCCTAATGTGAGGGAGTCATTTGACTTGGATCAGCTCCAGACAGCAGTGTCTATAGTAGAATGGTGCACACAGAGAGAGGGCAGGATCAGGCCTTCAATAAAACAAGTTCTTAGGCTTCTGTATGATACTTCAGAACCTATGCACAGTGGGTTTCTTCAAGATATTGAAGGTGAGGAGTGTGAAGGGAATCAGCAGAGTGGCAGAAGCAGCAGAGGTAAAATGCACAGAAATGAAGCATTATTTCAGAGCAAGGATGGAAGATATCTTGCTTCTTCTTCAAGTACATCCAGGTCTTACTGCAGCAAAAGCTTTTTACTTGAGACAAGTTCCCCACAGTCTCCTCTGAATATATTATCTGTCGAAGACAAATATCATTAG 1869 0.4066 MFGKLAFYFELLAFLGMQLPLTMADCPLDFTGSNFTLASSMCSNQFERGKCCRYINANIAVSVARFANVTRSLGVTLNASDPCLQTISQTLQHYGVPHNATIFCGFGTKISVNYECEGRTTVMQMLQSPRFVQVVENCKVPLAEESKCKKCLNAGINFIHHLIGIKDNITLSTCRDATFAALASQVDEMSTIDIASCFFRVQGLLKPRAIAAIMLLVLVVLIRQKRKELVGTDNFNKTPSSAMWKFQEGPSSMFRKFNYREIKKATEDFNTIIGQGGFGTVYKAHFRDDLVLAVKRMNKVSEQGEDEFCKEIELLARLHHRHLVALRGFCVKNHERFLMYEYMENGSLKDHLHSPSKAPLSWRTRIQVAIDVANALEYLHFYCDPPLWHRDIKSSNILLDENFVAKLADFGLAHASKNGSISFEAVNTNIMGTPGYMDPEYVVTHELTEKSDIYNYGVLLLEIVTGRRAIQDNKNLVEWAQPYMGPDSVTRLMELVDPNVRESFDLDQLQTAVSIVEWCTQREGRIRPSIKQVLRLLYDTSEPMHSGFLQDIEGEECEGNQQSGRSSRGKMHRNEALFQSKDGRYLASSSSTSRSYCSKSFLLETSSPQSPLNILSVEDKYH 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1184 622 CDD STKc_IRAK 273 537 - -
Prci11g1184 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 387 399 IPR008271 GO:0004672|GO:0006468
Prci11g1184 622 SUPERFAMILY Protein kinase-like (PK-like) 251 538 IPR011009 -
Prci11g1184 622 Gene3D Phosphorylase Kinase; domain 1 232 342 - -
Prci11g1184 622 ProSiteProfiles Protein kinase domain profile. 267 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1184 622 Pfam SPARK 24 168 IPR043891 -
Prci11g1184 622 ProSitePatterns Protein kinases ATP-binding region signature. 273 295 IPR017441 GO:0005524
Prci11g1184 622 PANTHER OS01G0750732 PROTEIN 162 561 - -
Prci11g1184 622 Gene3D Transferase(Phosphotransferase) domain 1 343 551 - -
Prci11g1184 622 Pfam Protein kinase domain 271 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1184 622 SMART serkin_6 267 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1184 622 FunFam Putative receptor-like protein kinase 236 342 - -
Prci11g1184 622 FunFam Putative receptor-like protein kinase 343 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1184 Prci-Chr11 10264785 10270334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1184 21 616 Receptor kinase-like Gene Family AT3G19300 55.982 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Prci11g1184 Pkinase 6.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1184 - - qsa:O6P43_011726 903.664