Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1177 ATGAGATCGAGCATGAACTTCAAGGGCTACGACGAAAGTGACAACCGCAATTCCATCGGGAATGGAATCAAGCCACCTACAAATCTCACACTCCTGAGGCAACCTTCAATATACTCCCTCACTTTTGAAGAGTTTCAGAGCACAATAGGTGGGCTTGGAAAGGACTTCGGCTCAATGAACATGGATGAACTCTTGAAGAACATATGGACAGCTGAAGAGACTCAATCACTGGCTGTGTCATCTTCAGCTAACGGAGGACAAGGTGGTAAAAACAACACCATCATCAACAACGACTATTATTATAATAACCCTAATGGTAATTTGCAGAGACAAGGGTCACTTACTTTGCCAAGAACTCTTAGTCAAAAAACTGTTGATGAGGTTTGGAGGGACTTGATGAAAGACAGTGGTGGGGCTAACAGTACGAAAGATAATAGTGGTGGGGTTGTTCCTTCTGCTTCTGCTTTGCCTCAGAGGCAACAAACTTTAGGTGAAATGACATTAGAGGAATTTTTAGTAAGAGCAGGCGTTGTCAGAGAAGACAATAATGTGCCTCTTCAAGTTGGAAGACCTCATGGCAACCAATGGTTCAATGGTGAAAATACTGGTTTGATGCTTGGGTTTCAACAGGCAAACGGGAATTTGGGTAACACTAATACGATGGTGAATAGCCATAATCCAGTTCCCAAACAACCTTCCACACTGTCATTACAGGTAAACACTGCTAACCCTACCCAGCACCAGCAGCCACCGCTTTTCCCCAAACCGCCAAATGTGGCTTTTGCCGCCGCCGCCGCGGTTGGTCCGATGCATTTGTTGAATAATTCTCAGCTTGACGGGAGGGGAGGAATGATTGGAGTTCAGGGAGGTGGTTTGACGGTGGTGAAGTCTCCGACGAGTCAGATATCGTCGCCACCGGAGGTTGTGACGAGGAGTAAGGGGGATGCGTCGTTGCATTCGCCAGTATCGTATGTGATTAACAGGCCCAGGAAGAGCAATCCGTTAGAGAAAGTGGTGGAGAGGAGACAGAGGAGGATGATAAAGAACAGAGAATCGGCTGCCAGGTCTCGCGCTCGTAAGCTGGCCTACACTATAGAACTGGAAGCTGAAGTTACTAAACTGAAGGAATTGAACCAAGAACTAAAAAGAAAGCAGGCTAAATTTGTGGAAATGCAGAACAATAATCAGGCTTTGGTGACACTGAAAGGGGCATGGGGAGGTAAAAGACAGTGCTTGAGAAGGACACTTACAGGACCATGGTAG 1263 0.4632 MRSSMNFKGYDESDNRNSIGNGIKPPTNLTLLRQPSIYSLTFEEFQSTIGGLGKDFGSMNMDELLKNIWTAEETQSLAVSSSANGGQGGKNNTIINNDYYYNNPNGNLQRQGSLTLPRTLSQKTVDEVWRDLMKDSGGANSTKDNSGGVVPSASALPQRQQTLGEMTLEEFLVRAGVVREDNNVPLQVGRPHGNQWFNGENTGLMLGFQQANGNLGNTNTMVNSHNPVPKQPSTLSLQVNTANPTQHQQPPLFPKPPNVAFAAAAAVGPMHLLNNSQLDGRGGMIGVQGGGLTVVKSPTSQISSPPEVVTRSKGDASLHSPVSYVINRPRKSNPLEKVVERRQRRMIKNRESAARSRARKLAYTIELEAEVTKLKELNQELKRKQAKFVEMQNNNQALVTLKGAWGGKRQCLRRTLTGPW 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1177 420 Pfam bZIP transcription factor 341 387 IPR004827 GO:0003700|GO:0006355
Prci11g1177 420 CDD bZIP_plant_BZIP46 341 385 - -
Prci11g1177 420 MobiDBLite consensus disorder prediction 138 154 - -
Prci11g1177 420 SUPERFAMILY Leucine zipper domain 341 389 IPR046347 GO:0003700|GO:0006355
Prci11g1177 420 Gene3D - 339 396 - -
Prci11g1177 420 MobiDBLite consensus disorder prediction 1 26 - -
Prci11g1177 420 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 33 420 IPR043452 GO:0003700|GO:0045893
Prci11g1177 420 MobiDBLite consensus disorder prediction 134 154 - -
Prci11g1177 420 MobiDBLite consensus disorder prediction 296 310 - -
Prci11g1177 420 MobiDBLite consensus disorder prediction 296 315 - -
Prci11g1177 420 Coils Coil 364 394 - -
Prci11g1177 420 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 344 359 IPR004827 GO:0003700|GO:0006355
Prci11g1177 420 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 339 384 IPR004827 GO:0003700|GO:0006355
Prci11g1177 420 SMART brlzneu 337 404 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1177 Prci-Chr11 10243838 10248398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1177 21 420 bZIP Transcription Factor Family AT3G19290 47.597 7.99e-98 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci11g1177 bZIP_1 6.8e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1177 K14432 - jre:108988934 392.889