Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1129 ATGTTAGGGATAGGATCTATGATGGGCTCGCTTCCTCCACCACAACTGAGCTTGGATTTGAGACCCACCTTTGTTCCCAAGACGATCACTGATTTTCTCTACGAAGTTTCCGCGATCGCCAATGCGCCCGATAAGCTCTCCAGGCTCGATGATTTCGTCAAGAGATTGGAAGAGGAAACGAGGAAGATTGACGCCTTCAGGCGTGAGCTTCCTCTCTGTATGCTCCTCTTGAATGATGCAATTTTAGTCCTGAAGGAGGAATCGGCCAAATTCAGGATACCTGATTCTCAGCCGGTATTGGAAGAATTTATACCCTTGAGGAAAGAATGTGAGCAGGAGGAGGAAACCGAAACAGAAAAGGAATGCCGAGATAAGAAGGACTGGATGAGTTCTGTACAACTCTGGAACACTGCTAGTTATCCCACCTGTGAACAAACAGGACAGTATAAATTAGAAAACATGCGGAAAAATGATGAAGAACCTTCTGTGGCAGAGGATCCTTTCAAATCTTGTCGAAATAGAACTGGAAGGCGGGTTTTCATGCCTTTTACAACATACGCTCCAGTTCCTGTGACCACTTTGGCAACCAAGGAAGAAAAGGAAGAGTCTGATATTAATGGACTTTCTCTTGTGACTCCTGGAGCTAAACATCTGAGGGAGGGCCCTGTTTCTAGCGGATCAAGAATAACATCTAGCAGGGCAGTTTCATCCCCTCCTTGCAGTGACCAACCAAGTTTACGCACTGGACAGCAGCAGACTGCTCGGAAACAGAGAAGGTGTTGGTCACCAGAGTTGCATCGTCGATTTGTCAATGCCCTGCAGCAACTTGGAGGTTCTCAAGCTGCCACTCCAAAGCAAATTAGAGAACTCATGCAAGTTGATGGCCTGACCAACGATGAAGTGAAGAGCCATTTACAAAAATACCGACTTCACACCCGAAGACTTCCTGCTTCCACAGCTACACCTGCATTTCAGGGTCTGGCTCTCCTCAGGGTCCCCTCCAGTTAA 1008 0.4712 MLGIGSMMGSLPPPQLSLDLRPTFVPKTITDFLYEVSAIANAPDKLSRLDDFVKRLEEETRKIDAFRRELPLCMLLLNDAILVLKEESAKFRIPDSQPVLEEFIPLRKECEQEEETETEKECRDKKDWMSSVQLWNTASYPTCEQTGQYKLENMRKNDEEPSVAEDPFKSCRNRTGRRVFMPFTTYAPVPVTTLATKEEKEESDINGLSLVTPGAKHLREGPVSSGSRITSSRAVSSPPCSDQPSLRTGQQQTARKQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRLPASTATPAFQGLALLRVPSS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1129 335 Pfam Myb-like DNA-binding domain 258 309 IPR001005 -
Prci11g1129 335 Gene3D - 255 313 - -
Prci11g1129 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 253 313 IPR017930 -
Prci11g1129 335 Coils Coil 49 69 - -
Prci11g1129 335 MobiDBLite consensus disorder prediction 224 258 - -
Prci11g1129 335 MobiDBLite consensus disorder prediction 197 259 - -
Prci11g1129 335 NCBIfam myb-like DNA-binding domain, SHAQKYF class 256 311 IPR006447 GO:0003677
Prci11g1129 335 FunFam Myb family transcription factor 255 313 - -
Prci11g1129 335 SUPERFAMILY Homeodomain-like 253 314 IPR009057 -
Prci11g1129 335 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 17 323 IPR044787 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1129 Prci-Chr11 9937222 9940257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1129 15 330 G2-like Transcription Factor Family AT2G03500 37.725 1.15e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci11g1129 Myb_DNA-binding 5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1129 - - qsa:O6P43_011684 413.69