Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1127 ATGGATCGGTCGGCGATCACCGTTGGACCGGGGATGGATTTGCCGATTATGCACGACAGTGACCGCTATGAGCTCGTGCGTGATATTGGGTCTGGAAATTTTGGGGTCGCGAGGCTCATGAGGGACAAGCAAACAGACGAGCTCGTTGCTGTGAAGTATATAGAGAGGGGTGATAAGATAGATGAAAATGTGCAAAGGGAAATCATAAATCACAGATCACTTAGGCACCCCAATATTGTCAGGTTCAAGGAGGTCATATTGACACCAACACATTTGGCTATTGTGATGGAATATGCTTCTGGAGGAGAGCTATTTGAACGAATATGCAATGCTGGGCGTTTCAGCGAGGATGAGGCTCGTTTCTTTTTCCAGCAACTTATTTCAGGGGTTAGCTACTGTCATGCAATGCAAGTATGCCACCGAGACTTGAAGTTGGAGAACACACTACTGGATGGTAGTCCAGCTCCTCGTTTGAAGATATGTGATTTTGGGTACTCCAAGTCCTCTGTGCTACATTCACAACCAAAATCGACAGTTGGTACTCCAGCTTATATCGCTCCAGAAGTTTTGCTTAAGAAGGAGTATGATGGCAAGATTGCAGATGTATGGTCTTGTGGGGTGACCTTATATGTCATGTTGGTGGGTGCGTATCCTTTTGAGGACCCAGAGGAACCTAAAAATTTCCGCAAGACAATACATAGGATTTTGAATGTTCAATACTCAATTCCTGACTATGTTCATATATCACCCGAATGCCAGCATCTCATCTCAAGGATATTTGTTGCTGACCCTGCAAAGAGGATAACCATCCCCGAGATCAGAAACCATGAATGGTTTCTAAAGAACCTTCCGGCTGATCTTATGGATGATCATTGTACAATGAACAACCAGTTTGAGGAGCCTGATCAGCCAATGCAGAGCATAGAGGAAATCATGCAAATAATTGCTGAGCTACTTCCTGCAGCTGGAACTCAGTCTCTCAACAACTATCTTACTGGTAGCTTAGATATTGATGATGATATGGAGGAGGACCTGGAGTCTGATCCTGATCTCGACATTGATAGCAGTGGAGAAATAGTCTATGCAATGTAA 1092 0.4432 MDRSAITVGPGMDLPIMHDSDRYELVRDIGSGNFGVARLMRDKQTDELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYSIPDYVHISPECQHLISRIFVADPAKRITIPEIRNHEWFLKNLPADLMDDHCTMNNQFEEPDQPMQSIEEIMQIIAELQXPAAGTQSLNNYLTGSLDIDDDMEEDLESDPDLDIDSSGEIVYAM 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1127 364 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1127 364 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1127 364 PANTHER SERINE/THREONINE KINASE 22 306 - -
Prci11g1127 364 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1127 364 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Prci11g1127 364 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Prci11g1127 364 FunFam Serine/threonine-protein kinase SRK2E 14 98 - -
Prci11g1127 364 FunFam Serine/threonine-protein kinase SRK2E 99 287 - -
Prci11g1127 364 CDD STKc_SnRK2-3 22 278 - -
Prci11g1127 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Prci11g1127 364 Gene3D Transferase(Phosphotransferase) domain 1 99 287 - -
Prci11g1127 364 SUPERFAMILY Protein kinase-like (PK-like) 16 315 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1127 Prci-Chr11 9898481 9902764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1127 16 304 CBL-interacting serine-threonine protein kinases AT4G24400 42.475 1.51e-71 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Prci11g1127 Pkinase 2.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1127 K14498 - qsu:112032862 684.871