Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1106 ATGGATAAGCAAAAGAACGTAGGAGTTCAGGAGTACCCTGAATTCTTTGATGTGTTCCTCCCTAAATTCAACTCCGAAAGGATGCGTATCCCAAATGATTTTGTCCAATCTTTACGTGGGAGGATGTTAGAGAAAGCCCTCCTCAAGAGTCCTAGGGGCATGGTGTGGCATGTCAAGATCCGTGACATTAGCGGTGGCATGTATTTTTACCATGGTTGGAAGCAGTTCATTCAGGACAATTCATCGGAGGTTGGAAGCTTCATCGTCTTCCAATTTGATGGAAGTAATACATTCAAGTTCAAAATATACAAAACAAATCGCCTTGAAATGATTGAGACATATGCAGAGGAAGAAGATGGAGAAAATGATTCTGCAAAGGAGGCAGAGGAGGAGGAATATGATGACGAGGGTGCATATGTGAAAAAAGAGAAGGATGAACAAGTCAACAACAGAAATAGGAGGAGGGAACGCTTCAGTCTAATTAGTGTCAGCCACAGGGGCTCTTCTTCTAAGGCTAACCAAATTAGCCTCGAGGAATATGGTATTGATGCAGAGTTATAA 561 0.4225 MDKQKNVGVQEYPEFFDVFLPKFNSERMRIPNDFVQSLRGRMLEKALLKSPRGMVWHVKIRDISGGMYFYHGWKQFIQDNSSEVGSFIVFQFDGSNTFKFKIYKTNRLEMIETYAEEEDGENDSAKEAEEEEYDDEGAYVKKEKDEQVNNRNRRRERFSLISVSHRGSSSKANQISLEEYGIDAEL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1106 186 Coils Coil 111 131 - -
Prci11g1106 186 SUPERFAMILY DNA-binding pseudobarrel domain 11 105 IPR015300 -
Prci11g1106 186 PANTHER B3 DOMAIN-CONTAINING 9 147 - -
Prci11g1106 186 ProSiteProfiles B3 DNA-binding domain profile. 13 106 IPR003340 GO:0003677
Prci11g1106 186 MobiDBLite consensus disorder prediction 115 134 - -
Prci11g1106 186 Gene3D - 7 107 IPR015300 -
Prci11g1106 186 MobiDBLite consensus disorder prediction 115 151 - -
Prci11g1106 186 CDD B3_DNA 13 104 IPR003340 GO:0003677
Prci11g1106 186 SMART B3_2 15 106 IPR003340 GO:0003677
Prci11g1106 186 Pfam B3 DNA binding domain 20 104 IPR003340 GO:0003677
Prci11g1106 186 MobiDBLite consensus disorder prediction 135 151 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1106 13 137 REM Transcription Factor Family AT3G06220 30.216 3.47e-16 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci11g1106 B3 2.3e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1106 - - pcin:129286072 362.844