Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1063 ATGGCTTCAACTTCCGATTCCCCGCCTTCGGCTGATTCATCTTCCTCGGATTCTCCTCCGTCACCCCCACCGGATTCAAATTCACCTGACGATTCCACCTCCTCGCCGCCACCCCAGTCCCCTCCTCCATCATCCCCTCCACCACAGTCTCCCCCGCCGCAATCTCCTCCTCCCTCATCGCCACCACCGTCCGATAACCAATCACCCCCACCGCCACCCGACCAAGACAATGGCAACAACTCATCTCCTCCCCCTCCTCCACCTTCTAATAGCAACGATAACAACGGTGGAGACGATAACAAAACAAGGAGCCCTCCGCCGCCTCCACCTCCATCGAATTCCAAGGGAGAGTTTTCGCCTCCGCCACCGGTGCACCGGTTGTCTCCATCGGAAAAAAGTTCACATGGACCATCGAGTAATCCATCACCGTCATCAGGTAGCAACAACGATGGATCTCAACTGAGCGTACCAGCTATCATTGGGTTGGCTGCCGGAGCAGGCTTGCTGCTGCTCGTGTTCATTATCGCCTTCGTTGCATGCAACAGAAGGAAGAAGAAGAGATCTGAAGGTCCCATTATTTACTACGCCAACAAAAAATTTGATGATGACTATTACAAGCACGCAAAGAAGGGAAACAATTGGAACAATACTGGTTACAACACTGGTGACCAACACGTTATGAACATTCCGGCACCTCCAGGAGGAGGAGGAGGAGGCGTGAATAAGACTCCTTGGGGAGCACCGCCGGCTCCATTCTCCGGAAACATGAACAGCGGTGAGATGAGCAGCGCGAGCTATTCAGGGCCGGTAGGTCCTCCGCTGCCTCCGCCACACCCCTCGGTGGCACTAGGGTTCAACAAGAGCACCTTCACGTACGAGGAGTTAGCGGCGGCAACCAATGGGTTCGCCCAAGGGAACCTGCTGGGACAAGGCGGGTTCGGGTATGTGCACAAAGGAGTGCTGCCGAACGGGAAGGAGATAGCCGTGAAGAGCCTCAAGTCCACGGGAGGGCAAGGAGACAAAGAATTCCAAGCCGAGGTTGATATCATCAGCCGAGTCCATCATCGCCATCTCGTTTCTCTTGTTGGATATTGCATTCAAGATGGTCGCAGTCTCTTGGTCTATGAGTTTGTGCCTAACAAAACAATGGAATACCATCTTCACGGAAAGGATCGGCCTGTTATGGATTGGCCGACTAGGCTCAAAATCGCGATTGGATCGGCCAAAGGACTTGCTTACTTGCACGAGGATTGCCACCCACGGATCATTCACCGTGACATAAAAGGCGCAAACATTCTACTTGAAAACAACTTCGAAGCTAAGGTGGCAGATTTTGGATTGGCAAAGTTTACCCAAGACAACAACACCCATGTTTCCACTCGTGTAATGGGAACATTCGGGTATTTGGCTCCTGAGTATGCTTCAAGTGGCAAATTAACTGAGAAGTCTGATGTCTTCTCATTCGGTATTATGCTCCTGGAGCTCATAACAGGACGACCTCCGGTTGACACCACCGGAGAGTATGAAGAGGACAGTTTAGTTGACTGGGCCAGACCTCTTTGCATAAAGGCGATGGAAAGTGGAAGCTTTGAAGGTCTGGTGGATCCACGATTAGCGAACAATTATGACATGCAGGAGATGGCCCGTATGGTGGCTTGTGCTGGTGCCAGTGTCAGGCACTCCGCGAGAAGGCGACCAAAAATGAGCCAAATTGTACGCGCACTGGAGGGTGATGTGTCACTGGATGACCTGAGCGAGGGAGTGAAGCCTGGGCAGAGTTCAATATTCACAAACAGCAGTATGGAATATGATGCTAGCACTTACAGTGCGGACATGAAGAAGTTCAGAAAGCTTGCATTGGATAGCGGCTACGCAAGCAGTGAATTTGGCCAAACAAGCGAGTATGGTCTCAACCCCTCCTCCTCAAGCAGTGAAGAGCACTCTTCTGAATACGGCAAGTCCAAGTAA 1968 0.5188 MASTSDSPPSADSSSSDSPPSPPPDSNSPDDSTSSPPPQSPPPSSPPPQSPPPQSPPPSSPPPSDNQSPPPPPDQDNGNNSSPPPPPPSNSNDNNGGDDNKTRSPPPPPPPSNSKGEFSPPPPVHRLSPSEKSSHGPSSNPSPSSGSNNDGSQLSVPAIIGLAAGAGLLLLVFIIAFVACNRRKKKRSEGPIIYYANKKFDDDYYKHAKKGNNWNNTGYNTGDQHVMNIPAPPGGGGGGVNKTPWGAPPAPFSGNMNSGEMSSASYSGPVGPPLPPPHPSVALGFNKSTFTYEELAAATNGFAQGNLLGQGGFGYVHKGVLPNGKEIAVKSLKSTGGQGDKEFQAEVDIISRVHHRHLVSLVGYCIQDGRSLLVYEFVPNKTMEYHLHGKDRPVMDWPTRLKIAIGSAKGLAYLHEDCHPRIIHRDIKGANILLENNFEAKVADFGLAKFTQDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGIMLLELITGRPPVDTTGEYEEDSLVDWARPLCIKAMESGSFEGLVDPRLANNYDMQEMARMVACAGASVRHSARRRPKMSQIVRALEGDVSLDDLSEGVKPGQSSIFTNSSMEYDASTYSADMKKFRKLALDSGYASSEFGQTSEYGLNPSSSSSEEHSSEYGKSK 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1063 655 Pfam Protein tyrosine and serine/threonine kinase 305 573 IPR001245 GO:0004672|GO:0006468
Prci11g1063 655 MobiDBLite consensus disorder prediction 15 91 - -
Prci11g1063 655 SMART serkin_6 302 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1063 655 MobiDBLite consensus disorder prediction 628 655 - -
Prci11g1063 655 Gene3D Transferase(Phosphotransferase) domain 1 378 586 - -
Prci11g1063 655 ProSiteProfiles Protein kinase domain profile. 302 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1063 655 SUPERFAMILY Protein kinase-like (PK-like) 277 575 IPR011009 -
Prci11g1063 655 MobiDBLite consensus disorder prediction 131 150 - -
Prci11g1063 655 Gene3D Phosphorylase Kinase; domain 1 279 377 - -
Prci11g1063 655 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 166 626 IPR047117 -
Prci11g1063 655 FunFam proline-rich receptor-like protein kinase PERK1 280 377 - -
Prci11g1063 655 MobiDBLite consensus disorder prediction 1 150 - -
Prci11g1063 655 MobiDBLite consensus disorder prediction 628 647 - -
Prci11g1063 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Prci11g1063 655 FunFam Proline-rich receptor-like protein kinase PERK1 378 586 - -
Prci11g1063 655 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Prci11g1063 655 MobiDBLite consensus disorder prediction 102 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1063 Prci-Chr11 9387012 9391408 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1063 125 650 Trihelix Transcription Factor Family AT1G70460 48.007 3.43e-154 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Prci11g1063 PK_Tyr_Ser-Thr 3.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1063 - - gmx:100806299 707.597