Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1046 ATGGTGGACCATCGGCGAAATATAGTGTCTCTTGGGTTCTTGCTCTTGTTGCTTTTTCAGTTCACATTTCAACAGCTCGAGCCTCTGAGTTCATCCGCTGAGCGAGTCGCCCTACTTCAACTTCGATCTTCTTTGGGCTTGAGAAGCAGGGAATGGCCAATAAAAGCCGACCCTTGCTTAATCTGGAATGGCCTGAGCTGTGAAAATGGTAGAGTCACTGGGATCAATATTTCTGGGTTTAGAAGAACAAGACTTGGGAGGCGAAACCCACAATTCTCTATCGACGCTTTAGCCAATTTGACCTTCCTGCAATCCTTCAATGCGTCCAAGTTTCTTCTTCCTGGTCCTATTCCTCACTGGTTTGGTCAAAAGCTTTCTTCACTTAGAGTGCTTGATCTTCGTTCTTGCTCCATCACTGGTGCAATTCCTTCGAGTCTTGGGAATCTAATAAGCCTAAATACTCTCTATTTATCTAATAATAACCTCACTGGGATCGTCCCTGATAGTCTTAGCCAACTTTTAGGCCTTTCTGTTCTTGATCTTTCGCGGAATTTTCTCTCAGGATCCTTGCCCACATCCTTTGCCTTTCTTGGGAATCTTTCTTTCTTTGACATTTCTTCCAACTATTTATCCGGGTCGATTCCTCAAGGAATTGGGGCACTTTCTAAGTTACAATACTTGAATCTTTCCAGCAATGGTCTAACTTCTTCTATACCTGCTCAACTCGGGGATCTTAGTAACCTAGTTGACCTTGATCTAAGCGATAATTCCTTGTACGGTCTGGTGCCTCCGGGTTTAATGGGGCTGAGGAGTTTGCGGAGAATGAAGCTTGGGAACAACATTCTTGATGGACCTTTGCCGCAGAACTCGTTTCATACTACATTGCAGTTGCAGATCATAGAGCTGAGACAAAATAATTTTACTGGGACCTTGCCTGATAAGTTGTGGTATCTTCCAAGATTGAGCTTTCTAGATGTCTCCAGTAATAACTTCACTGGTGTGCTTCCTAGTTCTAGTTCTACTGCTAATGCTAATCCTGCAGTTAAGGCCAATTTTTCGCATAATCTTTTTTACGGAAGCATCACTCCTCTGCTCAAAAAGTTCAGTTTCATTGATCTGTCAAGCAATTATTTTGAAGGCAAGGTTCTGGATTTCGCAGTGAATGCATCACTGGGTAGCAACTGCCTCCAGAACGCATCAGATCAGAGGACGACAGAAGAATGTGCCTCATTCTATTCCAAGAGAGGCCTCTCTTTTCATAATTTTGGGCAAGCAAACATGACAAGAGCTCGTGCAGCAGAAAGCTCTAGGAAGCACAGTAGAAGAAAGTTTGTACTAGCAGGAATTTTAGGTGGAGTTGGTTTCATTGCAGTTTTGGCGCTGCTGCTGGTGTTGTTGCTCCTGTGTACTGGTAAGCGGAGCAAGTCAAATAACACAGGGGCTCGTGTGGGCGCTGCACTTGCTGGAGGCAGTCCTGCACCTGCTGATGCATTGATAGAATTATCAAAATTAGGAGACTCATTTACATTTCAGCAGCTGCTCAAGGCTACAGTTGATTTCAGTGATGCAAATCTTATCAAACACGGTCACACGGGTGATCTCTTCAATGGTGTTTTGGAAAGTGGGATATCTGTAGTCATAAAAAGGGTTGATTTGCGTTCAACAAAAAATGAGAATGCTTACATGTCAGAACTAGACCTTTTCAGTAAAGTTTCTCACACAAGATTGGTTCCCCTGTTGGGTCATTGCTTAGAAAATGACAATGAGAATTTCCTGGTTTATAAACATTTGCCAAATGGGGACTTGTTGAATTGCTTGCACAACCGAGAAACTACACATGAAGATGGGACATCGCAGTCATTGGATTGGATAACAAGATTGAAAATTTCTATTGGAACTGCGGAGGCCCTATGTTATTTGCATCATGAATGCAATCCACCCTTTGTTCACAGAGACATTAAAGCAACCAGTATACTTCTAGATGATAAATATGAAGTTCGGTTAGGGAGTCTAAGTGAAGCCTGCACTCAGGAAGGGGATAGTCATCAAAGGAAAATCTCAAGGTTGCTACGGTTACCCCAGTCATCTGATCAAGGCTCATCTGGTTCATCACCAGCAGTTTGTGCCTATGATGTCTATTGCTTTGGGAAAGTATTGCTTGAGATGGTAACCGGTAAACTGGGAATTGGTGCATCTGGTGATGCAGAAGTAAAAGAATGGTTGGAACAGACACTACCTTACATTAGTATTTATGACAAGGAGCTTGTGACAAAGATTATGGATCCATCCATGGTTGTTGATGAGGATTTCTTAGAGGAAGTGTGGGCAGTGGCTATCATCGCGAGGTCTTGCCTGAACCCTAAACCTTCAAAACGACCCCAGATGAGAAATGTCCTCAAGGCTCTTGAAAACCCTCTAAAAGTCATAAGGGAAGAGAGTTACAGTTCTGCAAGGCTTAGAACAACCTCTTCCAGAGGCTCTTGGAATGCTGCTTTATTTTCTAGTTGGCGTCAGAATTCTAATGTAACAGTAATTGCAGCAGCTTCTGGTGCAAGAGCTGAAGAAGGTGAGTTTTCATTGTCCCGCAGGCGTCATTCGACTGAGATAGTTCCGGAACCTTCTGGTAGCATTCGAGAGGTGGAGAAGCTGGAGTAG 2655 0.4343 MVDHRRNIVSLGFLLLLLFQFTFQQLEPLSSSAERVALLQLRSSLGLRSREWPIKADPCLIWNGLSCENGRVTGINISGFRRTRLGRRNPQFSIDALANLTFLQSFNASKFLLPGPIPHWFGQKLSSLRVLDLRSCSITGAIPSSLGNLISLNTLYLSNNNLTGIVPDSLSQLLGLSVLDLSRNFLSGSLPTSFAFLGNLSFFDISSNYLSGSIPQGIGALSKLQYLNLSSNGLTSSIPAQLGDLSNLVDLDLSDNSLYGLVPPGLMGLRSLRRMKLGNNILDGPLPQNSFHTTLQLQIIELRQNNFTGTLPDKLWYLPRLSFLDVSSNNFTGVLPSSSSTANANPAVKANFSHNLFYGSITPLLKKFSFIDLSSNYFEGKVLDFAVNASLGSNCLQNASDQRTTEECASFYSKRGLSFHNFGQANMTRARAAESSRKHSRRKFVLAGILGGVGFIAVLALLLVLLLLCTGKRSKSNNTGARVGAALAGGSPAPADALIELSKLGDSFTFQQLLKATVDFSDANLIKHGHTGDLFNGVLESGISVVIKRVDLRSTKNENAYMSELDLFSKVSHTRLVPLLGHCLENDNENFLVYKHLPNGDLLNCLHNRETTHEDGTSQSLDWITRLKISIGTAEALCYLHHECNPPFVHRDIKATSILLDDKYEVRLGSLSEACTQEGDSHQRKISRLLRLPQSSDQGSSGSSPAVCAYDVYCFGKVLLEMVTGKLGIGASGDAEVKEWLEQTLPYISIYDKELVTKIMDPSMVVDEDFLEEVWAVAIIARSCLNPKPSKRPQMRNVLKALENPLKVIREESYSSARLRTTSSRGSWNAALFSSWRQNSNVTVIAAASGARAEEGEFSLSRRRHSTEIVPEPSGSIREVEKLE 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1046 884 Gene3D Ribonuclease Inhibitor 31 189 IPR032675 -
Prci11g1046 884 FunFam Leucine-rich repeat receptor protein kinase EMS1 191 289 - -
Prci11g1046 884 SMART LRR_typ_2 221 245 IPR003591 -
Prci11g1046 884 SMART LRR_typ_2 125 148 IPR003591 -
Prci11g1046 884 SMART LRR_typ_2 318 341 IPR003591 -
Prci11g1046 884 SMART LRR_typ_2 173 196 IPR003591 -
Prci11g1046 884 SMART LRR_typ_2 149 172 IPR003591 -
Prci11g1046 884 SUPERFAMILY Protein kinase-like (PK-like) 504 802 IPR011009 -
Prci11g1046 884 Pfam Leucine rich repeat 223 280 IPR001611 GO:0005515
Prci11g1046 884 Pfam Leucine rich repeat 127 184 IPR001611 GO:0005515
Prci11g1046 884 Gene3D Transferase(Phosphotransferase) domain 1 597 822 - -
Prci11g1046 884 MobiDBLite consensus disorder prediction 856 884 - -
Prci11g1046 884 ProSiteProfiles Leucine-rich repeat profile. 151 172 IPR001611 GO:0005515
Prci11g1046 884 ProSiteProfiles Protein kinase domain profile. 520 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1046 884 FunFam Putative LRR receptor-like serine/threonine-protein kinase 597 822 - -
Prci11g1046 884 Gene3D Phosphorylase Kinase; domain 1 495 596 - -
Prci11g1046 884 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 435 827 - -
Prci11g1046 884 Pfam Protein tyrosine and serine/threonine kinase 526 802 IPR001245 GO:0004672|GO:0006468
Prci11g1046 884 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 31 190 - -
Prci11g1046 884 Gene3D Ribonuclease Inhibitor 190 292 IPR032675 -
Prci11g1046 884 Gene3D Ribonuclease Inhibitor 293 391 IPR032675 -
Prci11g1046 884 SUPERFAMILY L domain-like 97 360 - -
Prci11g1046 884 FunFam Predicted protein 490 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1046 Prci-Chr11 9293372 9297960 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1046 33 694 Miscellaneous Gene Families AT2G16250 54.940 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Prci11g1046 PK_Tyr_Ser-Thr 1.6e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1046 - - qsa:O6P43_001901 1149.42