Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1044 ATGGCGTCCGCAGAAGTTGAATACAGGTGCTTCGTCGGGGGGCTCGCATGGGCCACCGACAGCGAGGCCCTTGAGAAGGCCTTTGCTCCCTTTGGCGAGATCATCGAATCGAAGGTTATTAATGATCGCGAGACTGGCAGGTCAAGAGGATTCGGATTTGTAACCTTCTCGTCTGAGCAGGCCATGAGAGATGCTATCGAGGGGATGAACGGTCAGGATCTCGATGGTCGTAATATTACGGTGAACGAGGCTCAATCTCGTGGCCGAGGCGGCGGCGGAGGAGGCGGCGGATATGGCGGTGGAGGTGGCGGATACGGTGGAGGTGGAGGCTACAGCCGTGGTGGAGGCGGATACGGAGGCGGAGGCCGTCGTGAAGGTGGATATAACCGTAACGGTGGAGGCTATGGGGGTGGCGGTGGCTACGGTGGTGGTTATGGTGGCGGTCGTGAGCGAGGAGGCTACGGTGATGGTGGATCTCGCTACTCCAGAGGCGGAGGTGCTTCCGACGGTAGCTGGAGGAACTAG 525 0.5981 MASAEVEYRCFVGGLAWATDSEALEKAFAPFGEIIESKVINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGQDLDGRNITVNEAQSRGRGGGGGGGGYGGGGGGYGGGGGYSRGGGGYGGGGRREGGYNRNGGGYGGGGGYGGGYGGGRERGGYGDGGSRYSRGGGASDGSWRN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1044 174 SMART rrm1_1 9 82 IPR000504 GO:0003723
Prci11g1044 174 MobiDBLite consensus disorder prediction 122 174 - -
Prci11g1044 174 SUPERFAMILY RNA-binding domain, RBD 8 96 IPR035979 GO:0003676
Prci11g1044 174 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Prci11g1044 174 Gene3D - 2 106 IPR012677 -
Prci11g1044 174 FunFam Glycine-rich RNA-binding protein GRP1A 2 114 - -
Prci11g1044 174 CDD RRM2_NsCP33_like 9 84 - -
Prci11g1044 174 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Prci11g1044 174 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 5 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1044 Prci-Chr11 9270567 9271708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1044 10 81 Eukaryotic Initiation Factors Gene Family AT2G23350 40.278 1.14e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1044 - K13195 fve:101299909 164.851