Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1026 ATGGCTCCAAAGAAGGATAAGGGTCCTCCACCATCCTCCAAACCCGCCAAGTCTGGTGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAAGTGAACAACATGGTGCTCTTTGACCAGGCCACTTATGACAAGCTCCTCTCGGAGGCACCCAAATACAAGCTTATCACTCCTTCAATTCTCTCTGATCGTTTGAGGATTAATGGATCACTTGCAAGGAAGGCAATTAGAGAATTGATGGCGAGAGGTGCAATCAGGATGGTATCTGCACACGCCAGTCAGCAGATATACACTAGGGCTACTAATACCTAG 327 0.4771 MAPKKDKGPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGAIRMVSAHASQQIYTRATNT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1026 108 FunFam 40S ribosomal protein S25 21 108 - -
Prci11g1026 108 Pfam S25 ribosomal protein 11 105 IPR004977 -
Prci11g1026 108 Gene3D - 21 108 - -
Prci11g1026 108 PANTHER 40S RIBOSOMAL PROTEIN S25 1 108 IPR004977 -
Prci11g1026 108 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1026 Prci-Chr11 9150246 9152216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1026 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 93.458 1.80e-55 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1026 K02975 - nnu:104595643 159.458